RNA–Protein interactions for RNA: ENST00000461328.1

VARS-219, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 662 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-219ENST00000461328 LIFRP42702 1097 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 GNAQP50148 359 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 TRAF1Q13077 416 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 ADCK5Q3MIX3 580 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 LRIT3Q3SXY7 679 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 CXCL17Q6UXB2 119 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 MICU3Q86XE3 530 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 SYTL5Q8TDW5 730 aaPredicted RBP17.83■□□□□ 0.44
VARS-219ENST00000461328 MTMR8Q96EF0 704 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 LRCH3Q96II8 777 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 TOX2Q96NM4 488 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 MAP3K14Q99558 947 aa17.83■□□□□ 0.44
VARS-219ENST00000461328 ARVCFO00192 962 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 KIAA0355O15063 1070 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 PPP1R11O60927 126 aaPredicted RBP17.82■□□□□ 0.44
VARS-219ENST00000461328 CABYRO75952 493 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 CFBP00751 764 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 HMGB1P09429 215 aaKnown RBP17.82■□□□□ 0.44
VARS-219ENST00000461328 RAG1P15918 1043 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 FAAP100Q0VG06 881 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 PPP2R5BQ15173 497 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 TSGA10IPQ3SY00 556 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 DHX32Q7L7V1 743 aaKnown RBP17.82■□□□□ 0.44
VARS-219ENST00000461328 NSUN6Q8TEA1 469 aaKnown RBP17.82■□□□□ 0.44
VARS-219ENST00000461328 SCFD2Q8WU76 684 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 JAKMIP1Q96N16 626 aaKnown RBP17.82■□□□□ 0.44
VARS-219ENST00000461328 TAAR1Q96RJ0 339 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 RIOX1Q9H6W3 641 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 COL20A1Q9P218 1284 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 SEC63Q9UGP8 760 aaKnown RBP17.82■□□□□ 0.44
VARS-219ENST00000461328 NAP1L2Q9ULW6 460 aaPredicted RBP17.82■□□□□ 0.44
VARS-219ENST00000461328 MYH6P13533 1939 aa17.82■□□□□ 0.44
VARS-219ENST00000461328 PNMA6FA0A0J9YX94 578 aa17.81■□□□□ 0.44
VARS-219ENST00000461328 RBM47A0AV96 593 aaKnown RBP17.81■□□□□ 0.44
VARS-219ENST00000461328 CYTH3O43739 400 aa17.81■□□□□ 0.44
VARS-219ENST00000461328 HSPA4P34932 840 aa17.81■□□□□ 0.44
VARS-219ENST00000461328 CDK7P50613 346 aa17.81■□□□□ 0.44
VARS-219ENST00000461328 SLC35G1Q2M3R5 365 aa17.81■□□□□ 0.44
VARS-219ENST00000461328 ARHGEF16Q5VV41 709 aa17.81■□□□□ 0.44
VARS-219ENST00000461328 OR6J1Q8NGC5 347 aa17.81■□□□□ 0.44
VARS-219ENST00000461328 RRP36Q96EU6 259 aaKnown RBP17.81■□□□□ 0.44
VARS-219ENST00000461328 RMDN3Q96TC7 470 aa17.81■□□□□ 0.44
VARS-219ENST00000461328 LZTS2Q9BRK4 669 aa17.81■□□□□ 0.44
VARS-219ENST00000461328 NKRFO15226 690 aaKnown RBP eCLIP17.8■□□□□ 0.44
VARS-219ENST00000461328 TLR3O15455 904 aaKnown RBP17.8■□□□□ 0.44
VARS-219ENST00000461328 PLEKHA8P1O95397 391 aa17.8■□□□□ 0.44
VARS-219ENST00000461328 CPT1AP50416 773 aa17.8■□□□□ 0.44
VARS-219ENST00000461328 BLOC1S2Q6QNY1 142 aa17.8■□□□□ 0.44
VARS-219ENST00000461328 SGMS1Q86VZ5 419 aa17.8■□□□□ 0.44
VARS-219ENST00000461328 IWS1Q96ST2 819 aa17.8■□□□□ 0.44
VARS-219ENST00000461328 SPZ1Q9BXG8 430 aa17.8■□□□□ 0.44
VARS-219ENST00000461328 SNX14Q9Y5W7 946 aa17.8■□□□□ 0.44
VARS-219ENST00000461328 OPLAHO14841 1288 aa17.79■□□□□ 0.44
VARS-219ENST00000461328 TXNP10599 105 aaKnown RBP17.79■□□□□ 0.44
VARS-219ENST00000461328 EIF2AK2P19525 551 aaKnown RBP17.79■□□□□ 0.44
VARS-219ENST00000461328 ITGB8P26012 769 aa17.79■□□□□ 0.44
VARS-219ENST00000461328 HSD17B4P51659 736 aa17.79■□□□□ 0.44
VARS-219ENST00000461328 EXOSC10Q01780 885 aaKnown RBP17.79■□□□□ 0.44
VARS-219ENST00000461328 ITGA7Q13683 1181 aa17.79■□□□□ 0.44
VARS-219ENST00000461328 TTLL4Q14679 1199 aa17.79■□□□□ 0.44
VARS-219ENST00000461328 STXBP2Q15833 593 aa17.79■□□□□ 0.44
VARS-219ENST00000461328 BRDTQ58F21 947 aaPredicted RBP17.79■□□□□ 0.44
VARS-219ENST00000461328 FAM126BQ8IXS8 530 aa17.79■□□□□ 0.44
VARS-219ENST00000461328 KLF18A0A0U1RQI7 1052 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 ZBTB43O43298 467 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 MYL3P08590 195 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 CPA1P15085 419 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 PSMA5P28066 241 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 SHHQ15465 462 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 APOA5Q6Q788 366 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 SEPT14Q6ZU15 432 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 CMTR1Q8N1G2 835 aaKnown RBP17.78■□□□□ 0.44
VARS-219ENST00000461328 FANCBQ8NB91 859 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 PXMP2Q9NR77 195 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 POLR3EQ9NVU0 708 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 MAP3K20Q9NYL2 800 aaKnown RBP17.78■□□□□ 0.44
VARS-219ENST00000461328 TBX21Q9UL17 535 aa17.78■□□□□ 0.44
VARS-219ENST00000461328 GOLGA8AA7E2F4 631 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 GOLGA8BA8MQT2 603 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 GCOM1H8Y6P7 765 aaPredicted RBP17.77■□□□□ 0.44
VARS-219ENST00000461328 TIMP1P01033 207 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 POLR2MP0CAP2 368 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 HOXA13P31271 388 aaPredicted RBP17.77■□□□□ 0.44
VARS-219ENST00000461328 PSMC6P62333 389 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 GHRHRQ02643 423 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 FPGSQ05932 587 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 RTN1Q16799 776 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 TMTC3Q6ZXV5 915 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 CCDC82Q8N4S0 544 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 SRBD1Q8N5C6 995 aaKnown RBP17.77■□□□□ 0.44
VARS-219ENST00000461328 SAMD3Q8N6K7 520 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 SLC43A3Q8NBI5 491 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 COPS5Q92905 334 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 KCNB2Q92953 911 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 SEZ6LQ9BYH1 1024 aa17.77■□□□□ 0.44
VARS-219ENST00000461328 RBM28Q9NW13 759 aaKnown RBP17.77■□□□□ 0.44
VARS-219ENST00000461328 ARIH2O95376 493 aa17.76■□□□□ 0.43
VARS-219ENST00000461328 NR3C2P08235 984 aa17.76■□□□□ 0.43
VARS-219ENST00000461328 CASTP20810 708 aaKnown RBP17.76■□□□□ 0.43
VARS-219ENST00000461328 SMARCA1P28370 1054 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms