RNA–Protein interactions for RNA: ENST00000461221.5

BRCA1-205, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 5,693 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-205ENST00000461221 KIF9Q9HAQ2 790 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 LMBRD1Q9NUN5 540 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 COX16Q9P0S2 106 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 NPR1P16066 1061 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 TMED1Q13445 227 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 SLC12A1Q13621 1099 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 SLMAPQ14BN4 828 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 TAF11Q15544 211 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 KLHL29Q96CT2 875 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 SLC38A10Q9HBR0 1119 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 PDE11AQ9HCR9 933 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 RNF14Q9UBS8 474 aa9.76□□□□□ -0.85
BRCA1-205ENST00000461221 ABCC1P33527 1531 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 TOPBP1Q92547 1522 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 EIF2AK4Q9P2K8 1649 aaKnown RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 SSH2Q76I76 1423 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 UHRF1BP1LA0JNW5 1464 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 MED7O43513 233 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 FOSP01100 380 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 GAP43P17677 238 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 MAPK4P31152 587 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 MESDQ14696 234 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 GLE1Q53GS7 698 aaKnown RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 KLC3Q6P597 504 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 FBXO11Q86XK2 927 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 PLA2G4DQ86XP0 818 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 TAB3Q8N5C8 712 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 ZBTB18Q99592 522 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 USP40Q9NVE5 1235 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 CDC23Q9UJX2 597 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 PTPN22Q9Y2R2 807 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 LAD1O00515 517 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 ALAS1P13196 640 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 IFNAR2P48551 515 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 OCA2Q04671 838 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 EHHADHQ08426 723 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 RSRC2Q7L4I2 434 aaKnown RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 DNAAF3Q8N9W5 541 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 IP6K1Q92551 441 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 DHX38Q92620 1227 aaKnown RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 PAWRQ96IZ0 340 aaKnown RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 UIMC1Q96RL1 719 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 RRAGDQ9NQL2 400 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 OLA1Q9NTK5 396 aaKnown RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 IRAK4Q9NWZ3 460 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 TOP2BQ02880 1626 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 PIK3C2GO75747 1445 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 LRRIQ4A6NIV6 560 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 ZBBXA8MT70 800 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 LMNAP02545 664 aaKnown RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 FBLN1P23142 703 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 CDC25BP30305 580 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 HOXA7P31268 230 aaPredicted RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 COPB1P53618 953 aaKnown RBP9.75□□□□□ -0.85
BRCA1-205ENST00000461221 SGO2Q562F6 1265 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 FAM47AQ5JRC9 791 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 SPOPLQ6IQ16 392 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 RNF217Q8TC41 542 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 SNX25Q9H3E2 840 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 SLC8A2Q9UPR5 921 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 FRMD3A2A2Y4 597 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 JAK2O60674 1132 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 HOXC9P31274 260 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 GCKRQ14397 625 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 TCP11X2Q5H9J9 407 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 ZNF790Q6PG37 636 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 LRRC8AQ8IWT6 810 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 RETREG2Q8NC44 543 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 PAGR1Q9BTK6 254 aa9.75□□□□□ -0.85
BRCA1-205ENST00000461221 PGRMC1O00264 195 aaKnown RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 ARHGEF9O43307 516 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 MAN1A2O60476 641 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 ZAP70P43403 619 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 RNF207Q6ZRF8 634 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 CACTINQ8WUQ7 758 aaKnown RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 PBKQ96KB5 322 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 EYA1Q99502 592 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 MRPL47Q9HD33 250 aaKnown RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 KDM5BQ9UGL1 1544 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 TOM1L1O75674 476 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 KRT1P04264 644 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 RPSAP08865 295 aaKnown RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 PRKG1Q13976 671 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 TBCCQ15814 346 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 TRIML2Q8N7C3 387 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 TRAIPQ9BWF2 469 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 LMCD1Q9NZU5 365 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 SCG2P13521 617 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 RASSF7Q02833 373 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 ABI1Q8IZP0 508 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 PARD3Q8TEW0 1356 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 CCDC127Q96BQ5 260 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 ZNF653Q96CK0 615 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 SUGCTQ9HAC7 445 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 A0A087WUV0 522 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 WDR64B1ANS9 1081 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 ZNF500O60304 480 aaPredicted RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 PSMC2P35998 433 aaKnown RBP9.74□□□□□ -0.85
BRCA1-205ENST00000461221 C10orf76Q5T2E6 689 aa9.74□□□□□ -0.85
BRCA1-205ENST00000461221 TTLL7Q6ZT98 887 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms