RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 KRT26Q7Z3Y9 468 aa20.25■□□□□ 0.83
HPS3-202ENST00000460120 CEP112Q8N8E3 955 aa20.25■□□□□ 0.83
HPS3-202ENST00000460120 NHSQ6T4R5 1651 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 BICDL2A1A5D9 508 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 LONRF2Q1L5Z9 754 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 CCDC155Q8N6L0 562 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 DRC1Q96MC2 740 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L15C9J2P7 530 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L13C9JLJ4 530 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L11C9JVI0 530 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L18D6R9N7 530 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L22D6RA61 530 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L17D6RBQ6 530 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L19D6RCP7 530 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L20D6RJB6 530 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 EPHB6O15197 1021 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 TTLL1O95922 423 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 ATP1A1P05023 1023 aaKnown RBP20.24■□□□□ 0.83
HPS3-202ENST00000460120 OAS2P29728 719 aaKnown RBP20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L24Q0WX57 530 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 CNNM4Q6P4Q7 775 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 USP17L6PQ6QN14 398 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 MTMR9Q96QG7 549 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 DNAJC7Q99615 494 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 LACRTQ9GZZ8 138 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 MMRN2Q9H8L6 949 aa20.24■□□□□ 0.83
HPS3-202ENST00000460120 NHEJ1Q9H9Q4 299 aaPredicted RBP20.24■□□□□ 0.83
HPS3-202ENST00000460120 ZNHIT6Q9NWK9 470 aaKnown RBP20.24■□□□□ 0.83
HPS3-202ENST00000460120 MYL1P05976 194 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 MIIPQ5JXC2 388 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 KIAA0825Q8IV33 1275 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 ZSCAN29Q8IWY8 852 aaPredicted RBP20.23■□□□□ 0.83
HPS3-202ENST00000460120 SMCR8Q8TEV9 937 aaPredicted RBP20.23■□□□□ 0.83
HPS3-202ENST00000460120 FAM163AQ96GL9 167 aaPredicted RBP20.23■□□□□ 0.83
HPS3-202ENST00000460120 CUEDC2Q9H467 287 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 KANSL2Q9H9L4 492 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 MYO6Q9UM54 1294 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 CTAGE15A4D2H0 777 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 CTAGE8P0CG41 777 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 ADRA2BP18089 450 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 ASPRV1Q53RT3 343 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 MSL1Q68DK7 614 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 CTAGE6Q86UF2 777 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 CTAGE4Q8IX94 777 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 DDX12PQ92771 950 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 JAKMIP2Q96AA8 810 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 TANGO6Q9C0B7 1094 aa20.23■□□□□ 0.83
HPS3-202ENST00000460120 DDX25Q9UHL0 483 aaKnown RBP20.23■□□□□ 0.83
HPS3-202ENST00000460120 A0A1W2PQC6 194 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 KRT79Q5XKE5 535 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 CDC42EP5Q6NZY7 148 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 CERS3Q8IU89 383 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 ZHX3Q9H4I2 956 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 TAF1LQ8IZX4 1826 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 SHMT1P34896 483 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 GABPAQ06546 454 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 ZNF543Q08ER8 600 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 SMC1AQ14683 1233 aaKnown RBP20.22■□□□□ 0.83
HPS3-202ENST00000460120 FKBP15Q5T1M5 1219 aa20.22■□□□□ 0.83
HPS3-202ENST00000460120 NPHP3-ACAD11A0A0J9YXS1 232 aa20.21■□□□□ 0.83
HPS3-202ENST00000460120 NELFCDQ8IXH7 590 aa20.21■□□□□ 0.83
HPS3-202ENST00000460120 FUT8Q9BYC5 575 aa20.21■□□□□ 0.83
HPS3-202ENST00000460120 VSNL1P62760 191 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 C2CD5Q86YS7 1000 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 MAGEF1Q9HAY2 307 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 ABCB6Q9NP58 842 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 MYH1P12882 1939 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 PNMA6FA0A0J9YX94 578 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 ZNF185O15231 689 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 ZMYND10O75800 440 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 IPO7O95373 1038 aaKnown RBP20.2■□□□□ 0.82
HPS3-202ENST00000460120 STAT3P40763 770 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 FAM114A1Q8IWE2 563 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 NOC3LQ8WTT2 800 aaKnown RBP20.2■□□□□ 0.82
HPS3-202ENST00000460120 RAD54LQ92698 747 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 ZNF622Q969S3 477 aaKnown RBP eCLIP20.2■□□□□ 0.82
HPS3-202ENST00000460120 PSMB7Q99436 277 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 FGFBP2Q9BYJ0 223 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 PSTPIP2Q9H939 334 aa20.2■□□□□ 0.82
HPS3-202ENST00000460120 E9PMD0 336 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 HOXA10P31260 410 aaPredicted RBP20.19■□□□□ 0.82
HPS3-202ENST00000460120 NT5C2P49902 561 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 CRAMP1Q96RY5 1269 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 TTYH3Q9C0H2 523 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 COA1Q9GZY4 146 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 POLD4Q9HCU8 107 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 CDK5RAP2Q96SN8 1893 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 ENOX2Q16206 610 aaKnown RBP20.19■□□□□ 0.82
HPS3-202ENST00000460120 SP8Q8IXZ3 490 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 CUL5Q93034 780 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 GDAP1L1Q96MZ0 367 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 ATP6V0A2Q9Y487 856 aa20.19■□□□□ 0.82
HPS3-202ENST00000460120 CYLC1P35663 651 aaPredicted RBP20.18■□□□□ 0.82
HPS3-202ENST00000460120 IKQ13123 557 aaPredicted RBP20.18■□□□□ 0.82
HPS3-202ENST00000460120 UNC13DQ70J99 1090 aa20.18■□□□□ 0.82
HPS3-202ENST00000460120 ANKRD13CQ8N6S4 541 aa20.18■□□□□ 0.82
HPS3-202ENST00000460120 HAS1Q92839 578 aa20.18■□□□□ 0.82
HPS3-202ENST00000460120 CCDC42Q96M95 316 aa20.18■□□□□ 0.82
HPS3-202ENST00000460120 MMS19Q96T76 1030 aa20.18■□□□□ 0.82
HPS3-202ENST00000460120 RAB34Q9BZG1 259 aa20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 86.3 ms