RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 USP14P54578 494 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 PPATQ06203 517 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 CAMK4Q16566 473 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 LETM2Q2VYF4 491 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 RESP18Q5W5W9 173 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 GALNT17Q6IS24 598 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 FCHSD1Q86WN1 690 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 PRPF38AQ8NAV1 312 aaKnown RBP9.96□□□□□ -0.82
RIF1-208ENST00000457745 KCNG4Q8TDN1 519 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 CUL5Q93034 780 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 LENG9Q96B70 501 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 EPSTI1Q96J88 318 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 FUCA2Q9BTY2 467 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 GBA2Q9HCG7 927 aaPredicted RBP9.96□□□□□ -0.82
RIF1-208ENST00000457745 BRMS1Q9HCU9 246 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 RYDENQ9NUL5 291 aaKnown RBP9.96□□□□□ -0.82
RIF1-208ENST00000457745 CCPG1Q9ULG6 757 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 ASTN1O14525 1302 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 PASKQ96RG2 1323 aa9.96□□□□□ -0.82
RIF1-208ENST00000457745 FAM86B1E9PN63 330 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 CUTAO60888 179 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 MBD3O95983 291 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 CFBP00751 764 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 FAM86B2P0C5J1 330 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 GNA11P29992 359 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 NF2P35240 595 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 HSD17B4P51659 736 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 FSTL1Q12841 308 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 ADALQ6DHV7 355 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 ARMC9Q7Z3E5 817 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 NEK8Q86SG6 692 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 GRAMD1CQ8IYS0 662 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 BRI3BPQ8WY22 251 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 MRPS27Q92552 414 aaKnown RBP9.95□□□□□ -0.82
RIF1-208ENST00000457745 HAS1Q92839 578 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 MBOAT7Q96N66 472 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 MTMR9Q96QG7 549 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 ZIC5Q96T25 663 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 PTPN18Q99952 460 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 NUDT12Q9BQG2 462 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 PANK2Q9BZ23 570 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 ASCC2Q9H1I8 757 aaPredicted RBP9.95□□□□□ -0.82
RIF1-208ENST00000457745 CLSTN2Q9H4D0 955 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 SRPRBQ9Y5M8 271 aaKnown RBP9.95□□□□□ -0.82
RIF1-208ENST00000457745 ABCB11O95342 1321 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 RPTORQ8N122 1335 aa9.95□□□□□ -0.82
RIF1-208ENST00000457745 DOCK5Q9H7D0 1870 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 ZSWIM8A7E2V4 1837 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 VWA3AA6NCI4 1184 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 CXCL11O14625 94 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 CCNT1O60563 726 aaKnown RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 CYP2C8P10632 490 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 CMA1P23946 247 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 CASP1P29466 404 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 TRAPPC10P48553 1259 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 GHRHRQ02643 423 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 MMRN1Q13201 1228 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 COG2Q14746 738 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 SKOR2Q2VWA4 1001 aaPredicted RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 Q3C1V9 767 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 CKAP2LQ8IYA6 745 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 FAM177A1Q8N128 213 aaPredicted RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 KRI1Q8N9T8 703 aaKnown RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 SYTL5Q8TDW5 730 aaPredicted RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 CCDC12Q8WUD4 166 aaPredicted RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 BBXQ8WY36 941 aaPredicted RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 SYMPKQ92797 1274 aaKnown RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 TAAR1Q96RJ0 339 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 MMTAG2Q9BU76 263 aaKnown RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 RNF146Q9NTX7 359 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 TMOD4Q9NZQ9 345 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 NOL7Q9UMY1 257 aaKnown RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 TELO2Q9Y4R8 837 aa9.94□□□□□ -0.82
RIF1-208ENST00000457745 MORC2Q9Y6X9 1032 aaPredicted RBP9.94□□□□□ -0.82
RIF1-208ENST00000457745 IGLV3-22A0A075B6J6 115 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 FSD2A1L4K1 749 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 BTBD19C9JJ37 291 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 PIK3CDO00329 1044 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 ACTN4O43707 911 aaKnown RBP9.93□□□□□ -0.82
RIF1-208ENST00000457745 SREBF1P36956 1147 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 STAT3P40763 770 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 MRPL12P52815 198 aaKnown RBP9.93□□□□□ -0.82
RIF1-208ENST00000457745 ZNF445P59923 1031 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 ARHGAP4P98171 946 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 FAM160A1Q05DH4 1040 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 LONRF3Q496Y0 759 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 CCDC183Q5T5S1 534 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 SPRYD7Q5W111 196 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 SNRNP48Q6IEG0 339 aaKnown RBP9.93□□□□□ -0.82
RIF1-208ENST00000457745 LBX2Q6XYB7 198 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 RBM43Q6ZSC3 357 aaKnown RBP9.93□□□□□ -0.82
RIF1-208ENST00000457745 RASAL3Q86YV0 1011 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 FAM43AQ8N2R8 423 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 FGD4Q96M96 766 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 MTRQ99707 1265 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 RBSNQ9H1K0 784 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 RBPJLQ9UBG7 517 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 SERTAD1Q9UHV2 236 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 AGTPBP1Q9UPW5 1226 aa9.93□□□□□ -0.82
RIF1-208ENST00000457745 FRMPD4Q14CM0 1322 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms