RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 PNMA8AQ86V59 439 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 KRI1Q8N9T8 703 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 CCDC148Q8NFR7 591 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 RMDN2Q96LZ7 410 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 MYD88Q99836 296 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 DDX50Q9BQ39 737 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 DSCC1Q9BVC3 393 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 LIMA1Q9UHB6 759 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 MRC1P22897 1456 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PIAS1O75925 651 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ATP6V1G2O95670 118 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 T-ENOLP0DO92 83 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ALADP13716 330 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 GCKP35557 465 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 SYNE3Q6ZMZ3 975 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 SEPT14Q6ZU15 432 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PTF1AQ7RTS3 328 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 UHMK1Q8TAS1 419 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 RASGRP4Q8TDF6 673 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 IFT81Q8WYA0 676 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ZNF396Q96N95 335 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 DDX47Q9H0S4 455 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 TSPYL2Q9H2G4 693 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 TMEM165Q9HC07 324 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 JADE2Q9NQC1 790 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 HSFX1Q9UBD0 423 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PNMA2Q9UL42 364 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PCDHGB4Q9UN71 923 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PCDHGB5Q9Y5G0 923 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 WDR17Q8IZU2 1322 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ADAMTS13Q76LX8 1427 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 NOL4O94818 638 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ADAM9Q13443 819 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 KRT32Q14532 448 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PLEKHG4Q58EX7 1191 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 TCP11X2Q5H9J9 407 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 AADACL2Q6P093 401 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 DUS1LQ6P1R4 473 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 KDM7AQ6ZMT4 941 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 MMGT1Q8N4V1 131 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 C4orf32Q8N8J7 132 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 FBXO41Q8TF61 875 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ATXN2LQ8WWM7 1075 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 TMEM59LQ9UK28 342 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ITSN1Q15811 1721 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ATMINO43313 823 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ADAMTS2O95450 1211 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 CHRNB2P17787 502 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 CLNS1AP54105 237 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 NCALDP61601 193 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PTGDRQ13258 359 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 CCDC38Q502W7 563 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 HSP90AB4PQ58FF6 505 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 TTC39AQ5SRH9 613 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 BRAPQ7Z569 592 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ARMC2Q8NEN0 867 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 KCNN1Q92952 543 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 RNF25Q96BH1 459 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 SLC26A6Q9BXS9 759 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 CPVLQ9H3G5 476 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 HAUS4Q9H6D7 363 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 METTL5Q9NRN9 209 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 NALCNQ8IZF0 1738 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 CSMD1Q96PZ7 3565 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 HEXIM1O94992 359 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PLEKHA8P1O95397 391 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PARP1P09874 1014 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 MYBP10242 640 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 IDEP14735 1019 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 KCNMA1Q12791 1236 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 BLMHQ13867 455 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 OR52E8Q6IFG1 317 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ZNF572Q7Z3I7 529 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ADGRA1Q86SQ6 560 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 EZH1Q92800 747 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 ATP6V0A4Q9HBG4 840 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 BCCIPQ9P287 314 aaKnown RBP eCLIP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 AJAP1Q9UKB5 411 aaPredicted RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 SUGT1Q9Y2Z0 365 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 PCDHGA4Q9Y5G9 962 aa5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 SRPRBQ9Y5M8 271 aaKnown RBP5.04□□□□□ -1.6
DEPDC1-202ENST00000456315 BTBD11A6QL63 1104 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 H0YHG0 523 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 SART1O43290 800 aaKnown RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 MMP1P03956 469 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 PAOXQ6QHF9 649 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 TMTC1Q8IUR5 882 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 GLG1Q92896 1179 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 NUDT12Q9BQG2 462 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 TSGA10Q9BZW7 698 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 PIH1D3Q9NQM4 214 aaKnown RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ZNHIT6Q9NWK9 470 aaKnown RBP5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 MYO1AQ9UBC5 1043 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 AMACRQ9UHK6 382 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 TRPC6Q9Y210 931 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 CD2APQ9Y5K6 639 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 PIK3C2AO00443 1686 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 COL4A1P02462 1669 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 ARID1AO14497 2285 aa5.03□□□□□ -1.6
DEPDC1-202ENST00000456315 SYNRGQ9UMZ2 1314 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms