RNA–Protein interactions for RNA: ENST00000455790.5

PDGFB-204, Transcript of platelet derived growth factor subunit B, humanhuman

TSL 4

Gene PDGFB, Length 554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFB-204ENST00000455790 TLR3O15455 904 aaKnown RBP13.9□□□□□ -0.18
PDGFB-204ENST00000455790 CYTH3O43739 400 aa13.9□□□□□ -0.18
PDGFB-204ENST00000455790 MYL3P08590 195 aa13.9□□□□□ -0.18
PDGFB-204ENST00000455790 ACRP10323 421 aa13.9□□□□□ -0.18
PDGFB-204ENST00000455790 EIF2AK2P19525 551 aaKnown RBP13.9□□□□□ -0.18
PDGFB-204ENST00000455790 SMAD3P84022 425 aaKnown RBP13.9□□□□□ -0.18
PDGFB-204ENST00000455790 ZNF697Q5TEC3 545 aa13.9□□□□□ -0.18
PDGFB-204ENST00000455790 HOMER1Q86YM7 354 aa13.9□□□□□ -0.18
PDGFB-204ENST00000455790 NCOA7Q8NI08 942 aa13.9□□□□□ -0.18
PDGFB-204ENST00000455790 LSG1Q9H089 658 aaKnown RBP13.9□□□□□ -0.18
PDGFB-204ENST00000455790 TTYH1Q9H313 450 aaPredicted RBP13.9□□□□□ -0.18
PDGFB-204ENST00000455790 HIPK3Q9H422 1215 aa13.9□□□□□ -0.18
PDGFB-204ENST00000455790 MRPL11Q9Y3B7 192 aaKnown RBP13.9□□□□□ -0.18
PDGFB-204ENST00000455790 CHD9Q3L8U1 2897 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 PRUNE2Q8WUY3 3088 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 ZBTB5O15062 677 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 CFBP00751 764 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 TXNP10599 105 aaKnown RBP13.89□□□□□ -0.19
PDGFB-204ENST00000455790 CPT1AP50416 773 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 HSD17B4P51659 736 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 TROAPQ12815 778 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 PPIGQ13427 754 aaKnown RBP eCLIP13.89□□□□□ -0.199e-9■■■■■ 34
PDGFB-204ENST00000455790 WTAPQ15007 396 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 TMEM67Q5HYA8 995 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 TMEM240Q5SV17 173 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 CCDC62Q6P9F0 684 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 SEPT14Q6ZU15 432 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 MCF2L2Q86YR7 1114 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 NSUN6Q8TEA1 469 aaKnown RBP13.89□□□□□ -0.19
PDGFB-204ENST00000455790 PIGSQ96S52 555 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 RMDN3Q96TC7 470 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 MPHOSPH6Q99547 160 aaKnown RBP13.89□□□□□ -0.19
PDGFB-204ENST00000455790 MYL10Q9BUA6 226 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 NOC4LQ9BVI4 516 aaKnown RBP13.89□□□□□ -0.19
PDGFB-204ENST00000455790 AMNQ9BXJ7 453 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 WNT8AQ9H1J5 351 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 ALDH8A1Q9H2A2 487 aaPredicted RBP13.89□□□□□ -0.19
PDGFB-204ENST00000455790 TRMT13Q9NUP7 481 aaKnown RBP13.89□□□□□ -0.19
PDGFB-204ENST00000455790 POLR3EQ9NVU0 708 aa13.89□□□□□ -0.19
PDGFB-204ENST00000455790 MYH6P13533 1939 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 NKRFO15226 690 aaKnown RBP eCLIP13.88□□□□□ -0.19
PDGFB-204ENST00000455790 HOXA13P31271 388 aaPredicted RBP13.88□□□□□ -0.19
PDGFB-204ENST00000455790 CCL23P55773 120 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 GHRHRQ02643 423 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 TTLL4Q14679 1199 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 LY6KQ17RY6 165 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 IL31RAQ8NI17 732 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 IGDCC4Q8TDY8 1250 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 ESYT1Q9BSJ8 1104 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 MTG1Q9BT17 334 aaPredicted RBP13.88□□□□□ -0.19
PDGFB-204ENST00000455790 LY9Q9HBG7 655 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 PXMP2Q9NR77 195 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 PCDHA1Q9Y5I3 950 aa13.88□□□□□ -0.19
PDGFB-204ENST00000455790 SCN10AQ9Y5Y9 1956 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 ERICH2A1L162 156 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 A6NJR5 290 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 CYP2C9P11712 490 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 ARHGAP1Q07960 439 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 NBPF20Q3BBV1 942 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 RASIP1Q5U651 963 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 ARHGEF16Q5VV41 709 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 ZNF365Q70YC5 407 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 TMEM199Q8N511 208 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 AFG1LQ8WV93 481 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 PIBF1Q8WXW3 757 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 VWCEQ96DN2 955 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 MAF1Q9H063 256 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 SEMA6BQ9H3T3 888 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 RIOX1Q9H6W3 641 aa13.87□□□□□ -0.19
PDGFB-204ENST00000455790 GRXCR1A8MXD5 290 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 B4DLN1 442 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 SLC27A2O14975 620 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 PRC1O43663 620 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 NR3C2P08235 984 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 DNAJB2P25686 324 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 MRPL12P52815 198 aaKnown RBP13.86□□□□□ -0.19
PDGFB-204ENST00000455790 SART3Q15020 963 aaKnown RBP13.86□□□□□ -0.19
PDGFB-204ENST00000455790 STXBP2Q15833 593 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 FAM47CQ5HY64 1035 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 ZNF654Q8IZM8 581 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 SLC17A8Q8NDX2 589 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 SCLYQ96I15 445 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 IWS1Q96ST2 819 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 CDX2Q99626 313 aaPredicted RBP13.86□□□□□ -0.19
PDGFB-204ENST00000455790 PDCD2LQ9BRP1 358 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 IL23AQ9NPF7 189 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 CXXC1Q9P0U4 656 aaPredicted RBP13.86□□□□□ -0.19
PDGFB-204ENST00000455790 CHD7Q9P2D1 2997 aa13.86□□□□□ -0.19
PDGFB-204ENST00000455790 RBAK-RBAKDNI3L0D1 243 aa13.85□□□□□ -0.19
PDGFB-204ENST00000455790 RGS20O76081 388 aa13.85□□□□□ -0.19
PDGFB-204ENST00000455790 GH1P01241 217 aa13.85□□□□□ -0.19
PDGFB-204ENST00000455790 MMP3P08254 477 aa13.85□□□□□ -0.19
PDGFB-204ENST00000455790 PBX2P40425 430 aa13.85□□□□□ -0.19
PDGFB-204ENST00000455790 CREB3L3Q68CJ9 461 aa13.85□□□□□ -0.19
PDGFB-204ENST00000455790 PSRC1Q6PGN9 363 aaPredicted RBP13.85□□□□□ -0.19
PDGFB-204ENST00000455790 CATIPQ7Z7H3 387 aa13.85□□□□□ -0.19
PDGFB-204ENST00000455790 MYLIPQ8WY64 445 aa13.85□□□□□ -0.19
PDGFB-204ENST00000455790 ZFP91Q96JP5 570 aaPredicted RBP13.85□□□□□ -0.19
PDGFB-204ENST00000455790 SEZ6LQ9BYH1 1024 aa13.85□□□□□ -0.19
PDGFB-204ENST00000455790 BAZ2BQ9UIF8 2168 aaKnown RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms