RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 SCG3Q8WXD2 468 aaKnown RBP5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 CHMP4CQ96CF2 233 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 ATG4CQ96DT6 458 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 APBA2Q99767 749 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 GDF15Q99988 308 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 KLF16Q9BXK1 252 aaPredicted RBP5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.63□□□□□ -1.512e-6■■□□□ 11.5
GTF3C3-208ENST00000455546 SPATC1LQ9H0A9 340 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 ANO2Q9NQ90 1003 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 ATP8A2Q9NTI2 1148 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 FBXO28Q9NVF7 368 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 SWAP70Q9UH65 585 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 TMX2Q9Y320 296 aa5.63□□□□□ -1.51
GTF3C3-208ENST00000455546 SZT2Q5T011 3432 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 A0A1W2PRU2 124 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 GSG1L2A8MUP6 293 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 BACH1O14867 736 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 GLRX3O76003 335 aaKnown RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 ABL1P00519 1130 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 PGK2P07205 417 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 COL6A1P12109 1028 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 CAPN2P17655 700 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 ADORA2AP29274 412 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 MAGEA10P43363 369 aaPredicted RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 ICA1Q05084 483 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 ZNF211Q13398 564 aaPredicted RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 GRB14Q14449 540 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 TMEM132BQ14DG7 1078 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 TMED8Q6PL24 325 aaPredicted RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 C16orf86Q6ZW13 317 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 SLC9A9Q8IVB4 645 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 OTUD7AQ8TE49 926 aaPredicted RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 OSBP2Q969R2 916 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 CCDC17Q96LX7 622 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 STRBPQ96SI9 672 aaKnown RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 SEC62Q99442 399 aaKnown RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 NUP88Q99567 741 aaPredicted RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 CHMP4BQ9H444 224 aaKnown RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 DCTPP1Q9H773 170 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 VCPKMTQ9H867 229 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 ECHDC1Q9NTX5 307 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 SEPT3Q9UH03 358 aa5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 DDX20Q9UHI6 824 aaKnown RBP5.62□□□□□ -1.51
GTF3C3-208ENST00000455546 FAM187AA6NFU0 413 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 PATL2C9JE40 543 aaKnown RBP5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 M0R2C6 588 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 M0R2N6 131 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 RNF113AO15541 343 aaKnown RBP5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 STRNO43815 780 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 PRDM1O75626 825 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 IGHA2P01877 340 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 APPP05067 770 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 HOXC6P09630 235 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 CYBAP13498 195 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 TAL1P17542 331 aaPredicted RBP5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 WEE1P30291 646 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 BMP8BP34820 402 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 EPHA4P54764 986 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 NAA30Q147X3 362 aaPredicted RBP5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 FAM83BQ5T0W9 1011 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 ZSCAN25Q6NSZ9 544 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 Q7L0L9 218 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 AMOTL1Q8IY63 956 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 LPAR1Q92633 364 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 FERMT2Q96AC1 680 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 UBE2OQ9C0C9 1292 aaKnown RBP5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 KANSL2Q9H9L4 492 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 MKNK2Q9HBH9 465 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 INCENPQ9NQS7 918 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 CLIP2Q9UDT6 1046 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 ADAMTS5Q9UNA0 930 aa5.61□□□□□ -1.51
GTF3C3-208ENST00000455546 A6NJY4 79 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 F5H6K3 240 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 VWA5AO00534 786 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 WDR46O15213 610 aaKnown RBP5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 GPAA1O43292 621 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 FCER1AP12319 257 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 STAT3P40763 770 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 ADCYAP1R1P41586 468 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 PTGIRP43119 386 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 PRR20EP86478 221 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 PRR20CP86479 221 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 PRR20DP86480 221 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 PRR20BP86481 221 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 PRR20AP86496 221 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 KLRC3Q07444 240 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 MTMR3Q13615 1198 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 FAM47AQ5JRC9 791 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 OLFML2BQ68BL8 750 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 SLC39A5Q6ZMH5 540 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 Q6ZVU0 165 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 IFNL3Q8IZI9 196 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 ZNF444Q8N0Y2 327 aaPredicted RBP5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 CPXCR1Q8N123 301 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 MB21D1Q8N884 522 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 KBTBD3Q8NAB2 608 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 SHCBP1Q8NEM2 672 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 APPBP2Q92624 585 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 MAML3Q96JK9 1138 aa5.6□□□□□ -1.51
GTF3C3-208ENST00000455546 MMP19Q99542 508 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms