RNA–Protein interactions for RNA: ENST00000454849.5

MSH2-203, Transcript of mutS homolog 2, humanhuman

TSL 4

Gene MSH2, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-203ENST00000454849 ZBTB43O43298 467 aa28.77■■■□□ 2.2
MSH2-203ENST00000454849 ASGR1P07306 291 aa28.77■■■□□ 2.2
MSH2-203ENST00000454849 HMGB1P09429 215 aaKnown RBP28.77■■■□□ 2.2
MSH2-203ENST00000454849 CASTP20810 708 aaKnown RBP28.77■■■□□ 2.2
MSH2-203ENST00000454849 SEPT14Q6ZU15 432 aa28.77■■■□□ 2.2
MSH2-203ENST00000454849 COPS5Q92905 334 aa28.77■■■□□ 2.2
MSH2-203ENST00000454849 MPHOSPH6Q99547 160 aaKnown RBP28.77■■■□□ 2.2
MSH2-203ENST00000454849 TSEN34Q9BSV6 310 aaKnown RBP28.77■■■□□ 2.2
MSH2-203ENST00000454849 SEC63Q9UGP8 760 aaKnown RBP28.77■■■□□ 2.2
MSH2-203ENST00000454849 GCOM1H8Y6P7 765 aaPredicted RBP28.76■■■□□ 2.19
MSH2-203ENST00000454849 POLR2MP0CAP2 368 aa28.76■■■□□ 2.19
MSH2-203ENST00000454849 BRF1Q92994 677 aa28.76■■■□□ 2.19
MSH2-203ENST00000454849 PXMP2Q9NR77 195 aa28.76■■■□□ 2.19
MSH2-203ENST00000454849 RBM27Q9P2N5 1060 aaKnown RBP28.76■■■□□ 2.19
MSH2-203ENST00000454849 LOC102724159A0A0B4J2E5 919 aa28.75■■■□□ 2.19
MSH2-203ENST00000454849 B4DLN1 442 aa28.75■■■□□ 2.19
MSH2-203ENST00000454849 MYCLP12524 364 aaPredicted RBP28.75■■■□□ 2.19
MSH2-203ENST00000454849 RPS6KB1P23443 525 aa28.75■■■□□ 2.19
MSH2-203ENST00000454849 MRPL12P52815 198 aaKnown RBP28.75■■■□□ 2.19
MSH2-203ENST00000454849 PWP2Q15269 919 aaKnown RBP28.75■■■□□ 2.19
MSH2-203ENST00000454849 FSCN1Q16658 493 aaKnown RBP28.75■■■□□ 2.19
MSH2-203ENST00000454849 RTN1Q16799 776 aa28.75■■■□□ 2.19
MSH2-203ENST00000454849 DUSP28Q4G0W2 176 aa28.75■■■□□ 2.19
MSH2-203ENST00000454849 STARD7Q9NQZ5 370 aa28.75■■■□□ 2.19
MSH2-203ENST00000454849 GOLGA8AA7E2F4 631 aa28.74■■■□□ 2.19
MSH2-203ENST00000454849 GOLGA8BA8MQT2 603 aa28.74■■■□□ 2.19
MSH2-203ENST00000454849 ARIH2O95376 493 aa28.74■■■□□ 2.19
MSH2-203ENST00000454849 CST5P28325 142 aaPredicted RBP28.74■■■□□ 2.19
MSH2-203ENST00000454849 SMARCA1P28370 1054 aa28.74■■■□□ 2.19
MSH2-203ENST00000454849 TLE2Q04725 743 aa28.74■■■□□ 2.19
MSH2-203ENST00000454849 HABP4Q5JVS0 413 aaKnown RBP28.74■■■□□ 2.19
MSH2-203ENST00000454849 CXCL17Q6UXB2 119 aa28.74■■■□□ 2.19
MSH2-203ENST00000454849 PCSK9Q8NBP7 692 aaKnown RBP28.74■■■□□ 2.19
MSH2-203ENST00000454849 IL31RAQ8NI17 732 aa28.74■■■□□ 2.19
MSH2-203ENST00000454849 PRDM5Q9NQX1 630 aaPredicted RBP28.74■■■□□ 2.19
MSH2-203ENST00000454849 RBM47A0AV96 593 aaKnown RBP28.73■■■□□ 2.19
MSH2-203ENST00000454849 MOXD2PA6NHM9 499 aa28.73■■■□□ 2.19
MSH2-203ENST00000454849 PQBP1O60828 265 aaKnown RBP28.73■■■□□ 2.19
MSH2-203ENST00000454849 NR3C2P08235 984 aa28.73■■■□□ 2.19
MSH2-203ENST00000454849 MAGEA10P43363 369 aaPredicted RBP28.73■■■□□ 2.19
MSH2-203ENST00000454849 TRAF1Q13077 416 aa28.73■■■□□ 2.19
MSH2-203ENST00000454849 STXBP2Q15833 593 aa28.73■■■□□ 2.19
MSH2-203ENST00000454849 TXNP10599 105 aaKnown RBP28.72■■■□□ 2.19
MSH2-203ENST00000454849 CDC27P30260 824 aa28.72■■■□□ 2.19
MSH2-203ENST00000454849 MDM2Q00987 491 aaPredicted RBP28.72■■■□□ 2.19
MSH2-203ENST00000454849 SNX17Q15036 470 aa28.72■■■□□ 2.19
MSH2-203ENST00000454849 PPP2R5BQ15173 497 aa28.72■■■□□ 2.19
MSH2-203ENST00000454849 USP17L6PQ6QN14 398 aa28.72■■■□□ 2.19
MSH2-203ENST00000454849 SH3RF1Q7Z6J0 888 aa28.72■■■□□ 2.19
MSH2-203ENST00000454849 OR6J1Q8NGC5 347 aa28.72■■■□□ 2.19
MSH2-203ENST00000454849 SCFD2Q8WU76 684 aa28.72■■■□□ 2.19
MSH2-203ENST00000454849 GPKOWQ92917 476 aaPredicted RBP eCLIP28.72■■■□□ 2.19
MSH2-203ENST00000454849 IWS1Q96ST2 819 aa28.72■■■□□ 2.19
MSH2-203ENST00000454849 LARP6Q9BRS8 491 aaKnown RBP28.72■■■□□ 2.19
MSH2-203ENST00000454849 MAF1Q9H063 256 aa28.72■■■□□ 2.19
MSH2-203ENST00000454849 FAM217BQ9NTX9 383 aaPredicted RBP28.72■■■□□ 2.19
MSH2-203ENST00000454849 PSMA5P28066 241 aa28.71■■■□□ 2.19
MSH2-203ENST00000454849 GHRHRQ02643 423 aa28.71■■■□□ 2.19
MSH2-203ENST00000454849 LY6KQ17RY6 165 aa28.71■■■□□ 2.19
MSH2-203ENST00000454849 HEATR3Q7Z4Q2 680 aa28.71■■■□□ 2.19
MSH2-203ENST00000454849 GLT1D1Q96MS3 346 aa28.71■■■□□ 2.19
MSH2-203ENST00000454849 TRIOBPQ9H2D6 2365 aa28.7■■■□□ 2.19
MSH2-203ENST00000454849 ADD1P35611 737 aaKnown RBP28.7■■■□□ 2.18
MSH2-203ENST00000454849 PDCD2LQ9BRP1 358 aa28.7■■■□□ 2.18
MSH2-203ENST00000454849 UPF3BQ9BZI7 483 aaKnown RBP28.7■■■□□ 2.18
MSH2-203ENST00000454849 RBM28Q9NW13 759 aaKnown RBP28.7■■■□□ 2.18
MSH2-203ENST00000454849 V9GY48 417 aaPredicted RBP28.7■■■□□ 2.18
MSH2-203ENST00000454849 SORBS3O60504 671 aa28.69■■■□□ 2.18
MSH2-203ENST00000454849 PPFIA3O75145 1194 aa28.69■■■□□ 2.18
MSH2-203ENST00000454849 PSMC6P62333 389 aa28.69■■■□□ 2.18
MSH2-203ENST00000454849 NKX3-2P78367 333 aa28.69■■■□□ 2.18
MSH2-203ENST00000454849 FUT2Q10981 343 aa28.69■■■□□ 2.18
MSH2-203ENST00000454849 PGM5Q15124 567 aa28.69■■■□□ 2.18
MSH2-203ENST00000454849 Q9Y3F1 56 aa28.69■■■□□ 2.18
MSH2-203ENST00000454849 CNTNAP5Q8WYK1 1306 aa28.69■■■□□ 2.18
MSH2-203ENST00000454849 TRIM43BA6NCK2 446 aa28.68■■■□□ 2.18
MSH2-203ENST00000454849 EIF3JO75822 258 aaKnown RBP28.68■■■□□ 2.18
MSH2-203ENST00000454849 MYL3P08590 195 aa28.68■■■□□ 2.18
MSH2-203ENST00000454849 METAP2P50579 478 aaKnown RBP eCLIP28.68■■■□□ 2.18
MSH2-203ENST00000454849 TTLL4Q14679 1199 aa28.68■■■□□ 2.18
MSH2-203ENST00000454849 SMARCC2Q8TAQ2 1214 aa28.68■■■□□ 2.18
MSH2-203ENST00000454849 PPP1R13LQ8WUF5 828 aa28.68■■■□□ 2.18
MSH2-203ENST00000454849 TRIM43Q96BQ3 446 aaPredicted RBP28.68■■■□□ 2.18
MSH2-203ENST00000454849 PRO3102Q9H379 93 aa28.68■■■□□ 2.18
MSH2-203ENST00000454849 MAP3K20Q9NYL2 800 aaKnown RBP28.68■■■□□ 2.18
MSH2-203ENST00000454849 PRKAG2Q9UGJ0 569 aa28.68■■■□□ 2.18
MSH2-203ENST00000454849 C1orf53Q5VUE5 145 aa28.67■■■□□ 2.18
MSH2-203ENST00000454849 CCDC62Q6P9F0 684 aa28.67■■■□□ 2.18
MSH2-203ENST00000454849 RUFY3Q7L099 469 aa28.67■■■□□ 2.18
MSH2-203ENST00000454849 GDF15Q99988 308 aa28.67■■■□□ 2.18
MSH2-203ENST00000454849 ZSWIM6Q9HCJ5 1215 aa28.67■■■□□ 2.18
MSH2-203ENST00000454849 PDLIM7Q9NR12 457 aa28.67■■■□□ 2.18
MSH2-203ENST00000454849 MEIS2O14770 477 aa28.66■■■□□ 2.18
MSH2-203ENST00000454849 ZEB2O60315 1214 aa28.66■■■□□ 2.18
MSH2-203ENST00000454849 UBE2SQ16763 222 aa28.66■■■□□ 2.18
MSH2-203ENST00000454849 WWC2Q6AWC2 1192 aa28.66■■■□□ 2.18
MSH2-203ENST00000454849 VSIG10LQ86VR7 867 aa28.66■■■□□ 2.18
MSH2-203ENST00000454849 SAMD3Q8N6K7 520 aa28.66■■■□□ 2.18
MSH2-203ENST00000454849 CUL5Q93034 780 aa28.66■■■□□ 2.18
MSH2-203ENST00000454849 PSTPIP2Q9H939 334 aa28.66■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms