RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 HOOK2Q96ED9 719 aa5.72□□□□□ -1.49
RIF1-207ENST00000454583 GBP4Q96PP9 640 aa5.72□□□□□ -1.49
RIF1-207ENST00000454583 SLF1Q9BQI6 1058 aa5.72□□□□□ -1.49
RIF1-207ENST00000454583 ZSCAN16Q9H4T2 348 aaPredicted RBP5.72□□□□□ -1.49
RIF1-207ENST00000454583 GBA2Q9HCG7 927 aaPredicted RBP5.72□□□□□ -1.49
RIF1-207ENST00000454583 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.72□□□□□ -1.49
RIF1-207ENST00000454583 EVPLQ92817 2033 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 TDRD15B5MCY1 1934 aaKnown RBP5.71□□□□□ -1.49
RIF1-207ENST00000454583 NFASCO94856 1347 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 NPHP1O15259 732 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 SLC16A2P36021 539 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 STAT2P52630 851 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 TMEM63BQ5T3F8 832 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 DPY19L2Q6NUT2 758 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 APTXQ7Z2E3 356 aaKnown RBP5.71□□□□□ -1.49
RIF1-207ENST00000454583 RAB11FIP4Q86YS3 637 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 OLIG1Q8TAK6 271 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 ATG4CQ96DT6 458 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 UBA5Q9GZZ9 404 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 UPF3AQ9H1J1 476 aaKnown RBP5.71□□□□□ -1.49
RIF1-207ENST00000454583 VPS54Q9P1Q0 977 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 TUBE1Q9UJT0 475 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 KCNJ14Q9UNX9 436 aa5.71□□□□□ -1.49
RIF1-207ENST00000454583 GNEQ9Y223 722 aaKnown RBP5.71□□□□□ -1.49
RIF1-207ENST00000454583 V9GY48 417 aaPredicted RBP5.71□□□□□ -1.49
RIF1-207ENST00000454583 CHD5Q8TDI0 1954 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 EYSQ5T1H1 3165 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 COBLO75128 1261 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 YEATS4O95619 227 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 SLC3A2P08195 630 aaKnown RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 USP14P54578 494 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 UBE2HP62256 183 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 HIC1Q14526 733 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 GPR162Q16538 588 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 CATIPQ7Z7H3 387 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 MICU3Q86XE3 530 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 PURBQ96QR8 312 aaKnown RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 HSD17B14Q9BPX1 270 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 BCAS3Q9H6U6 928 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 GOPCQ9HD26 462 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 BLOC1S4Q9NUP1 217 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 RBM27Q9P2N5 1060 aaKnown RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 DIS3Q9Y2L1 958 aaKnown RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 SRPRBQ9Y5M8 271 aaKnown RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 SZT2Q5T011 3432 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 MYO1BO43795 1136 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 LGR5O75473 907 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 LYPLA2O95372 231 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 SNAI1O95863 264 aaPredicted RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 USP11P51784 963 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 AP3B2Q13367 1082 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 PRPF38AQ8NAV1 312 aaKnown RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 SMC1BQ8NDV3 1235 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 ZNF526Q8TF50 670 aaPredicted RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 DCPSQ96C86 337 aaKnown RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 DDX11Q96FC9 970 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 KAT14Q9H8E8 782 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 ELP3Q9H9T3 547 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 A1CFQ9NQ94 594 aaKnown RBP5.71□□□□□ -1.5
RIF1-207ENST00000454583 PXMP2Q9NR77 195 aa5.71□□□□□ -1.5
RIF1-207ENST00000454583 SYNGAP1Q96PV0 1343 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 SPATA31C2B4DYI2 1134 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 ZNF865P0CJ78 1059 aaPredicted RBP5.7□□□□□ -1.5
RIF1-207ENST00000454583 HOXD13P35453 343 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 PSEN1P49768 467 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 APLP1P51693 650 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 HMGCS2P54868 508 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 HERVK_113P62684 666 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 IQCB1Q15051 598 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 ARL6IP4Q66PJ3 421 aaKnown RBP5.7□□□□□ -1.5
RIF1-207ENST00000454583 OLFML2BQ68BL8 750 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 VSIG10LQ86VR7 867 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 BLIDQ8IZY5 108 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 ZNF444Q8N0Y2 327 aaPredicted RBP5.7□□□□□ -1.5
RIF1-207ENST00000454583 COA7Q96BR5 231 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 MOV10L1Q9BXT6 1211 aaKnown RBP5.7□□□□□ -1.5
RIF1-207ENST00000454583 PORCNQ9H237 461 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 PCDHA7Q9UN72 937 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 ZMYM2Q9UBW7 1377 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 hCG_1642624A0A1W2PR95 340 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 USP17L15C9J2P7 530 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 USP17L13C9JLJ4 530 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 USP17L11C9JVI0 530 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 USP17L18D6R9N7 530 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 USP17L22D6RA61 530 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 USP17L17D6RBQ6 530 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 USP17L19D6RCP7 530 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 USP17L20D6RJB6 530 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 TBX3O15119 743 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 USP17L24Q0WX57 530 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 TARBP2Q15633 366 aaKnown RBP5.7□□□□□ -1.5
RIF1-207ENST00000454583 RGMBQ6NW40 437 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 FAM173BQ6P4H8 233 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 TRAF7Q6Q0C0 670 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 CRIPAKQ8N1N5 446 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 MB21D1Q8N884 522 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 AFAP1L1Q8TED9 768 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 NUDT12Q9BQG2 462 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 ALG1Q9BT22 464 aa5.7□□□□□ -1.5
RIF1-207ENST00000454583 VEZTQ9HBM0 779 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms