RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 CLSTN1O94985 981 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 C6P13671 934 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 TACR2P21452 398 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 NOP2P46087 812 aaKnown RBP7.16□□□□□ -1.26
CUL3-208ENST00000454323 KIAA2012Q0VF49 1180 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 OVOS1Q6IE37 1185 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 NLRC3Q7RTR2 1065 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 CPLX3Q8WVH0 158 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 C8orf49Q96NF6 230 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 TRIM55Q9BYV6 548 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 PCDH18Q9HCL0 1135 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 SNTG2Q9NY99 539 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 NUDT5Q9UKK9 219 aa7.16□□□□□ -1.26
CUL3-208ENST00000454323 FAM221BA6H8Z2 402 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 U2SURPO15042 1029 aaKnown RBP7.15□□□□□ -1.26
CUL3-208ENST00000454323 ATF2P15336 505 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 CTSKP43235 329 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 PTPROQ16827 1216 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 BORAQ6PGQ7 559 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 CRTC3Q6UUV7 619 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 ANAPC16Q96DE5 110 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 DHRS1Q96LJ7 313 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 DEPDC7Q96QD5 511 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 CDK5RAP1Q96SZ6 601 aaKnown RBP7.15□□□□□ -1.26
CUL3-208ENST00000454323 BRINP2Q9C0B6 783 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 SLITRK6Q9H5Y7 841 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 MSRB2Q9Y3D2 182 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 DUSP10Q9Y6W6 482 aa7.15□□□□□ -1.26
CUL3-208ENST00000454323 TBC1D8O95759 1140 aa7.14□□□□□ -1.27
CUL3-208ENST00000454323 GSTM1P09488 218 aa7.14□□□□□ -1.27
CUL3-208ENST00000454323 PRR5P85299 388 aa7.14□□□□□ -1.27
CUL3-208ENST00000454323 AUHQ13825 339 aaKnown RBP7.14□□□□□ -1.27
CUL3-208ENST00000454323 SLC9A5Q14940 896 aa7.14□□□□□ -1.27
CUL3-208ENST00000454323 PLEKHG4Q58EX7 1191 aa7.14□□□□□ -1.27
CUL3-208ENST00000454323 LGI4Q8N135 537 aa7.14□□□□□ -1.27
CUL3-208ENST00000454323 KISS1RQ969F8 398 aaPredicted RBP7.14□□□□□ -1.27
CUL3-208ENST00000454323 CCDC113Q9H0I3 377 aa7.14□□□□□ -1.27
CUL3-208ENST00000454323 SMAD7O15105 426 aaKnown RBP7.13□□□□□ -1.27
CUL3-208ENST00000454323 ASGR2P07307 311 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 GIPRP48546 466 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 DLX2Q07687 328 aaPredicted RBP7.13□□□□□ -1.27
CUL3-208ENST00000454323 SEZ6Q53EL9 994 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 TNNI3KQ59H18 835 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 ZNF761Q86XN6 746 aaPredicted RBP7.13□□□□□ -1.27
CUL3-208ENST00000454323 TMEM52Q8NDY8 209 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 NLGN2Q8NFZ4 835 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 CPA5Q8WXQ8 436 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 TSPAN17Q96FV3 270 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 ZNF512BQ96KM6 892 aaPredicted RBP7.13□□□□□ -1.27
CUL3-208ENST00000454323 MRIQ9BWK5 157 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 PPT2Q9UMR5 302 aa7.13□□□□□ -1.27
CUL3-208ENST00000454323 POLR2BP30876 1174 aaKnown RBP7.12□□□□□ -1.27
CUL3-208ENST00000454323 CEBPAP49715 358 aaPredicted RBP7.12□□□□□ -1.27
CUL3-208ENST00000454323 RTP2Q5QGT7 225 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 GLB1LQ6UWU2 654 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 CCDC81Q6ZN84 652 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 FAM169BQ8N8A8 192 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 FBXO27Q8NI29 283 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 SMARCC1Q92922 1105 aaPredicted RBP7.12□□□□□ -1.27
CUL3-208ENST00000454323 ATG4CQ96DT6 458 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 MENTQ9BUN1 341 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 KRTAP3-1Q9BYR8 98 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 EHMT1Q9H9B1 1298 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 BRMS1Q9HCU9 246 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 MINPP1Q9UNW1 487 aa7.12□□□□□ -1.27
CUL3-208ENST00000454323 R3HCC1Q9Y3T6 440 aaKnown RBP7.12□□□□□ -1.27
CUL3-208ENST00000454323 TLR3O15455 904 aaKnown RBP7.11□□□□□ -1.27
CUL3-208ENST00000454323 FZD7O75084 574 aa7.11□□□□□ -1.27
CUL3-208ENST00000454323 ZBTB7AO95365 584 aa7.11□□□□□ -1.27
CUL3-208ENST00000454323 EIF6P56537 245 aaKnown RBP7.11□□□□□ -1.27
CUL3-208ENST00000454323 IGBP1P78318 339 aa7.11□□□□□ -1.27
CUL3-208ENST00000454323 SURF1Q15526 300 aa7.11□□□□□ -1.27
CUL3-208ENST00000454323 RNF187Q5TA31 235 aaPredicted RBP7.11□□□□□ -1.27
CUL3-208ENST00000454323 CELF2-AS1Q8N7Q2 184 aa7.11□□□□□ -1.27
CUL3-208ENST00000454323 PEX11GQ96HA9 241 aa7.11□□□□□ -1.27
CUL3-208ENST00000454323 TNFRSF10CO14798 259 aa7.1□□□□□ -1.27
CUL3-208ENST00000454323 FGF10O15520 208 aaPredicted RBP7.1□□□□□ -1.27
CUL3-208ENST00000454323 L1CAMP32004 1257 aa7.1□□□□□ -1.27
CUL3-208ENST00000454323 C7orf61Q8IZ16 206 aa7.1□□□□□ -1.27
CUL3-208ENST00000454323 REXO1Q8N1G1 1221 aaKnown RBP7.1□□□□□ -1.27
CUL3-208ENST00000454323 LILRB2Q8N423 598 aa7.1□□□□□ -1.27
CUL3-208ENST00000454323 ADAMTS17Q8TE56 1095 aa7.1□□□□□ -1.27
CUL3-208ENST00000454323 SLC6A18Q96N87 628 aa7.1□□□□□ -1.27
CUL3-208ENST00000454323 SLC12A9Q9BXP2 914 aa7.1□□□□□ -1.27
CUL3-208ENST00000454323 TSC22D4Q9Y3Q8 395 aa7.1□□□□□ -1.27
CUL3-208ENST00000454323 ZNF536O15090 1300 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 hCG_2014768A0A024R1R8 64 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 RAB11FIP3O75154 756 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 ZNF165P49910 485 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 DDR2Q16832 855 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 TBC1D10BQ4KMP7 808 aaPredicted RBP7.09□□□□□ -1.27
CUL3-208ENST00000454323 FAM26FQ5R3K3 315 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 NETO2Q8NC67 525 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 RBBP8NLQ8NC74 664 aaPredicted RBP7.09□□□□□ -1.27
CUL3-208ENST00000454323 OR6P1Q8NGX9 317 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 KANSL2Q9H9L4 492 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 IFT57Q9NWB7 429 aa7.09□□□□□ -1.27
CUL3-208ENST00000454323 NOP58Q9Y2X3 529 aaKnown RBP7.09□□□□□ -1.27
CUL3-208ENST00000454323 SF3B6Q9Y3B4 125 aaKnown RBP7.09□□□□□ -1.27
CUL3-208ENST00000454323 NME1P15531 152 aaKnown RBP7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms