RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 PCDHA6Q9UN73 950 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 PCDHA8Q9Y5H6 950 aa9.6□□□□□ -0.87
LMO3-210ENST00000453727 TMEM232C9JQI7 657 aa9.59□□□□□ -0.87
LMO3-210ENST00000453727 NF2P35240 595 aa9.59□□□□□ -0.87
LMO3-210ENST00000453727 MAP3K11Q16584 847 aa9.59□□□□□ -0.87
LMO3-210ENST00000453727 MAP1SQ66K74 1059 aaPredicted RBP9.59□□□□□ -0.87
LMO3-210ENST00000453727 FSIP1Q8NA03 581 aa9.59□□□□□ -0.87
LMO3-210ENST00000453727 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.59□□□□□ -0.87
LMO3-210ENST00000453727 VCPKMTQ9H867 229 aa9.59□□□□□ -0.87
LMO3-210ENST00000453727 L2HGDHQ9H9P8 463 aa9.59□□□□□ -0.87
LMO3-210ENST00000453727 C6orf50Q9HD87 102 aa9.59□□□□□ -0.87
LMO3-210ENST00000453727 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.59□□□□□ -0.87
LMO3-210ENST00000453727 PICK1Q9NRD5 415 aa9.59□□□□□ -0.87
LMO3-210ENST00000453727 DOCK1Q14185 1865 aa9.59□□□□□ -0.87
LMO3-210ENST00000453727 A0A1B0GVL5 298 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 A0A1W2PQ27 194 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 A0A1W2PQ64 194 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 A0A1W2PQD8 194 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 TRIM75PA6NK02 468 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 TULP1O00294 542 aaPredicted RBP9.58□□□□□ -0.88
LMO3-210ENST00000453727 PTPRAP18433 802 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 USP8P40818 1118 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 MNAT1P51948 309 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 IKQ13123 557 aaPredicted RBP9.58□□□□□ -0.88
LMO3-210ENST00000453727 SNW1Q13573 536 aaKnown RBP9.58□□□□□ -0.88
LMO3-210ENST00000453727 CDC37Q16543 378 aaPredicted RBP9.58□□□□□ -0.88
LMO3-210ENST00000453727 QRICH1Q2TAL8 776 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 FAM83BQ5T0W9 1011 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 REXO1L1PQ8IX06 675 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 JMYQ8N9B5 988 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 MRPS27Q92552 414 aaKnown RBP9.58□□□□□ -0.88
LMO3-210ENST00000453727 CLIC6Q96NY7 704 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 UBXN6Q9BZV1 441 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 MRVI1Q9Y6F6 885 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 ESYT2A0FGR8 921 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 CCDC189A1A4V9 331 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 GNA11P29992 359 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 CORO7P57737 925 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 SNAP25P60880 206 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 TYRO3Q06418 890 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 SPP2Q13103 211 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 ZNF174Q15697 407 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 CAMK4Q16566 473 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 TTC38Q5R3I4 469 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 SYDE2Q5VT97 1194 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 BTNL9Q6UXG8 535 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.58□□□□□ -0.88
LMO3-210ENST00000453727 FAM43BQ6ZT52 329 aaPredicted RBP9.58□□□□□ -0.88
LMO3-210ENST00000453727 EFCAB13Q8IY85 973 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 CCAR2Q8N163 923 aaKnown RBP9.58□□□□□ -0.88
LMO3-210ENST00000453727 ENGASEQ8NFI3 743 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 SGSM3Q96HU1 749 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 NMRK2Q9NPI5 230 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 DDX19AQ9NUU7 478 aaKnown RBP9.58□□□□□ -0.88
LMO3-210ENST00000453727 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.58□□□□□ -0.88
LMO3-210ENST00000453727 ZHX2Q9Y6X8 837 aa9.58□□□□□ -0.88
LMO3-210ENST00000453727 CCDC194A0A1B0GVG4 234 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 IREB2P48200 963 aaKnown RBP9.57□□□□□ -0.88
LMO3-210ENST00000453727 TRAPPC10P48553 1259 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 MAP3K9P80192 1104 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 FAM160A1Q05DH4 1040 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 MTMR2Q13614 643 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 TTLL12Q14166 644 aaPredicted RBP9.57□□□□□ -0.88
LMO3-210ENST00000453727 CCDC73Q6ZRK6 1079 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 CCDC34Q96HJ3 373 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 NUP62CLQ9H1M0 184 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 AS3MTQ9HBK9 375 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 CBX8Q9HC52 389 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 BIN2Q9UBW5 565 aaPredicted RBP9.57□□□□□ -0.88
LMO3-210ENST00000453727 FBXO2Q9UK22 296 aaPredicted RBP9.57□□□□□ -0.88
LMO3-210ENST00000453727 CEP131Q9UPN4 1083 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 SEC31AO94979 1220 aaKnown RBP9.57□□□□□ -0.88
LMO3-210ENST00000453727 TUBB4AP04350 444 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 CMA1P23946 247 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 CDC25BP30305 580 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 ADCY7P51828 1080 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 NDUFA8P51970 172 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 STAT2P52630 851 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 GRIN1Q05586 938 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 DGKZQ13574 1117 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 VGLL4Q14135 290 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 PPP2R5AQ15172 486 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 INF2Q27J81 1249 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 PPP1R18Q6NYC8 613 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 SHC4Q6S5L8 630 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 FMR1NBQ8N0W7 255 aaPredicted RBP9.57□□□□□ -0.88
LMO3-210ENST00000453727 KRI1Q8N9T8 703 aaKnown RBP9.57□□□□□ -0.88
LMO3-210ENST00000453727 ZNF280CQ8ND82 737 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 PLCD4Q9BRC7 762 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 KIAA1683Q9H0B3 1180 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 CLSTN2Q9H4D0 955 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 TMEM260Q9NX78 707 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 PRR12Q9ULL5 1215 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 CSADQ9Y600 493 aa9.57□□□□□ -0.88
LMO3-210ENST00000453727 IRF6O14896 467 aa9.56□□□□□ -0.88
LMO3-210ENST00000453727 CUTAO60888 179 aa9.56□□□□□ -0.88
LMO3-210ENST00000453727 PTPREP23469 700 aa9.56□□□□□ -0.88
LMO3-210ENST00000453727 SSR1P43307 286 aaKnown RBP9.56□□□□□ -0.88
LMO3-210ENST00000453727 BACE1P56817 501 aa9.56□□□□□ -0.88
LMO3-210ENST00000453727 CCDC144BQ3MJ40 725 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms