RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.2□□□□□ -0.3
VTA1-203ENST00000452973 V9GYY5 206 aaPredicted RBP13.2□□□□□ -0.3
VTA1-203ENST00000452973 SRCAPQ6ZRS2 3230 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 PSDA5PKW4 1024 aaPredicted RBP13.2□□□□□ -0.3
VTA1-203ENST00000452973 MYMKA6NI61 221 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 SOWAHDA6NJG2 315 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 VIL1P09327 827 aaKnown RBP13.2□□□□□ -0.3
VTA1-203ENST00000452973 STAT3P40763 770 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 FXR2P51116 673 aaKnown RBP eCLIP13.2□□□□□ -0.3
VTA1-203ENST00000452973 KCNB1Q14721 858 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 ECM1Q16610 540 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 PRR16Q569H4 304 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 CSGALNACT2Q8N6G5 542 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 CUEDC2Q9H467 287 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 DNAI1Q9UI46 699 aa13.2□□□□□ -0.3
VTA1-203ENST00000452973 ARHGAP6O43182 974 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 NBPF9Q3BBW0 867 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 KIAA1755Q5JYT7 1200 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 PPP4R3AQ6IN85 833 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 CCDC174Q6PII3 467 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 KIFC2Q96AC6 838 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 P2RX7Q99572 595 aaKnown RBP13.19□□□□□ -0.3
VTA1-203ENST00000452973 SIPA1L1O43166 1804 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 H7C1D1 291 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 MEIS2O14770 477 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 FXR1P51114 621 aaKnown RBP eCLIP13.19□□□□□ -0.3
VTA1-203ENST00000452973 FAM83BQ5T0W9 1011 aa13.19□□□□□ -0.3
VTA1-203ENST00000452973 ZFP91Q96JP5 570 aaPredicted RBP13.19□□□□□ -0.3
VTA1-203ENST00000452973 SPDYE3A6NKU9 549 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
VTA1-203ENST00000452973 MYL1P05976 194 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 CACNB1Q02641 598 aaPredicted RBP13.18□□□□□ -0.3
VTA1-203ENST00000452973 IRF2BP1Q8IU81 584 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 PSMD1Q99460 953 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 C7orf25Q9BPX7 421 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 ARHGEF10LQ9HCE6 1279 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 MAGEC2Q9UBF1 373 aaPredicted RBP13.18□□□□□ -0.3
VTA1-203ENST00000452973 PRR12Q9ULL5 1215 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 ZNRF3Q9ULT6 936 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 PPP2R2CQ9Y2T4 447 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 CXCL9Q07325 125 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 LRRC41Q15345 812 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 ANKRD40Q6AI12 368 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 GMCL1P1Q8NEA9 526 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 FAM151AQ8WW52 585 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 TBC1D7Q9P0N9 293 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 LIMA1Q9UHB6 759 aaKnown RBP13.18□□□□□ -0.3
VTA1-203ENST00000452973 HERC5Q9UII4 1024 aaKnown RBP13.18□□□□□ -0.3
VTA1-203ENST00000452973 KIAA1024Q9UPX6 916 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 ATRNL1Q5VV63 1379 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 STX10O60499 249 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 CFBP00751 764 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 GYPCP04921 128 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 TPM1P09493 284 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 GTF2F1P35269 517 aaKnown RBP eCLIP13.18□□□□□ -0.3
VTA1-203ENST00000452973 ARHGAP4P98171 946 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 SPAG1Q07617 926 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 ORC2Q13416 577 aaPredicted RBP13.18□□□□□ -0.3
VTA1-203ENST00000452973 PDIA5Q14554 519 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 DDX12PQ92771 950 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 GMCL1Q96IK5 515 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 GMLQ99445 158 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 ZHX3Q9H4I2 956 aa13.18□□□□□ -0.3
VTA1-203ENST00000452973 E9PMD0 336 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 STAT2P52630 851 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 UBXN2AP68543 259 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 TBC1D5Q92609 795 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 P2RX5Q93086 422 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 GLIS2Q9BZE0 524 aaPredicted RBP13.17□□□□□ -0.3
VTA1-203ENST00000452973 MAGEF1Q9HAY2 307 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 COL4A5P29400 1685 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 MYH7BA7E2Y1 1941 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 RNF225M0QZC1 329 aaPredicted RBP13.17□□□□□ -0.3
VTA1-203ENST00000452973 ZNF76P36508 570 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 TTI2Q6NXR4 508 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 SLC30A10Q6XR72 485 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 KIAA0895Q8NCT3 520 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 GLIS3Q8NEA6 775 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 RAD54LQ92698 747 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 PIM2Q9P1W9 311 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 ZBTB21Q9ULJ3 1066 aa13.17□□□□□ -0.3
VTA1-203ENST00000452973 C10orf71Q711Q0 1435 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 POTEB3A0JP26 581 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 POTECB2RU33 542 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 B4DLN1 442 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 ZSCAN12O43309 604 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 PBX1P40424 430 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 CNNM4Q6P4Q7 775 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 POTEBQ6S5H4 581 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 REXO1L1PQ8IX06 675 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 ZNF710Q8N1W2 664 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 CYP2W1Q8TAV3 490 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 LZTFL1Q9NQ48 299 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 STK17AQ9UEE5 414 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 MFAP3LO75121 409 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 GCFC2P16383 781 aaKnown RBP13.16□□□□□ -0.3
VTA1-203ENST00000452973 SPDYE2Q495Y8 402 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 NCAPH2Q6IBW4 605 aa13.16□□□□□ -0.3
VTA1-203ENST00000452973 PCMTD1Q96MG8 357 aaPredicted RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms