RNA–Protein interactions for RNA: ENST00000452441.5

DDR1-239, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,857 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-239ENST00000452441 MAATS1Q7Z4T9 603 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 BBXQ8WY36 941 aaPredicted RBP12.41□□□□□ -0.42
DDR1-239ENST00000452441 PCDHB13Q9Y5F0 798 aa12.41□□□□□ -0.42
DDR1-239ENST00000452441 NCK2O43639 380 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 PLEKP08567 350 aaPredicted RBP12.4□□□□□ -0.42
DDR1-239ENST00000452441 NR1I3Q14994 352 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 NAA35Q5VZE5 725 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 SND1Q7KZF4 910 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDR1-239ENST00000452441 NEK8Q86SG6 692 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 NOA1Q8NC60 698 aaKnown RBP12.4□□□□□ -0.42
DDR1-239ENST00000452441 IFIH1Q9BYX4 1025 aaKnown RBP12.4□□□□□ -0.42
DDR1-239ENST00000452441 DISC1Q9NRI5 854 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 SPEF2Q9C093 1822 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 ZBTB7AO95365 584 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 MOCS3O95396 460 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 AKR1B1P15121 316 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 ERCC5P28715 1186 aaPredicted RBP12.4□□□□□ -0.42
DDR1-239ENST00000452441 HOXA13P31271 388 aaPredicted RBP12.4□□□□□ -0.42
DDR1-239ENST00000452441 MRPL12P52815 198 aaKnown RBP12.4□□□□□ -0.42
DDR1-239ENST00000452441 PRR16Q569H4 304 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 TAX1BP1Q86VP1 789 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 TBC1D16Q8TBP0 767 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 CEP89Q96ST8 783 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 PHF20Q9BVI0 1012 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 ABHD10Q9NUJ1 306 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 CDC23Q9UJX2 597 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 KIAA1024Q9UPX6 916 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 SAR1BQ9Y6B6 198 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 STK36Q9NRP7 1315 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 RNF225M0QZC1 329 aaPredicted RBP12.4□□□□□ -0.42
DDR1-239ENST00000452441 PABPC4Q13310 644 aaKnown RBP eCLIP12.4□□□□□ -0.423e-6■□□□□ 9
DDR1-239ENST00000452441 CERKLQ49MI3 558 aaPredicted RBP12.4□□□□□ -0.42
DDR1-239ENST00000452441 MLXIPQ9HAP2 919 aa12.4□□□□□ -0.42
DDR1-239ENST00000452441 ZBTB12Q9Y330 459 aaPredicted RBP12.4□□□□□ -0.42
DDR1-239ENST00000452441 NDUFA10O95299 355 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 ATP1A2P50993 1020 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 POLR2FP61218 127 aaKnown RBP12.39□□□□□ -0.43
DDR1-239ENST00000452441 IRX5P78411 483 aaPredicted RBP12.39□□□□□ -0.43
DDR1-239ENST00000452441 PFKFB3Q16875 520 aaPredicted RBP12.39□□□□□ -0.43
DDR1-239ENST00000452441 KRT25Q7Z3Z0 450 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 TRIML1Q8N9V2 468 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 KCNQ5Q9NR82 932 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 MYH7P12883 1935 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 NPHP3-ACAD11A0A0J9YXS1 232 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 ESYT3A0FGR9 886 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 HGSO14964 777 aaPredicted RBP12.39□□□□□ -0.43
DDR1-239ENST00000452441 HPDP32754 393 aaPredicted RBP12.39□□□□□ -0.43
DDR1-239ENST00000452441 APBA1Q02410 837 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 AOC3Q16853 763 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 SRGAP1Q7Z6B7 1085 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 PLCD3Q8N3E9 789 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 TXLNBQ8N3L3 684 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 TAF4BQ92750 862 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 PSTPIP2Q9H939 334 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 LRRC4BQ9NT99 713 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 POLLQ9UGP5 575 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 PCDHA1Q9Y5I3 950 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 DDX60Q8IY21 1712 aaKnown RBP12.39□□□□□ -0.43
DDR1-239ENST00000452441 A0A1B0GTH6 734 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 CLIC2O15247 247 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 FTCDO95954 541 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 SARSP49591 514 aaKnown RBP12.39□□□□□ -0.43
DDR1-239ENST00000452441 NLGN1Q8N2Q7 840 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 GOLPH3Q9H4A6 298 aa12.39□□□□□ -0.43
DDR1-239ENST00000452441 TACC1O75410 805 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
DDR1-239ENST00000452441 STAT3P40763 770 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 SSR1P43307 286 aaKnown RBP12.38□□□□□ -0.43
DDR1-239ENST00000452441 VSNL1P62760 191 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 ZNF658Q5TYW1 1059 aaPredicted RBP12.38□□□□□ -0.43
DDR1-239ENST00000452441 RSRC2Q7L4I2 434 aaKnown RBP12.38□□□□□ -0.43
DDR1-239ENST00000452441 HDXQ7Z353 690 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 ADD3Q9UEY8 706 aaKnown RBP12.38□□□□□ -0.43
DDR1-239ENST00000452441 PCDHA12Q9UN75 941 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 ALDH1B1P30837 517 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 KRT83P78385 493 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 MKRN4PQ13434 485 aaPredicted RBP12.38□□□□□ -0.43
DDR1-239ENST00000452441 SECISBP2LQ93073 1101 aaKnown RBP12.38□□□□□ -0.43
DDR1-239ENST00000452441 CSRNP1Q96S65 589 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 FUT8Q9BYC5 575 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 COL4A1P02462 1669 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 PPP1R3GB7ZBB8 358 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 ATP1A1P05023 1023 aaKnown RBP12.38□□□□□ -0.43
DDR1-239ENST00000452441 GYS1P13807 737 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 ABCB4P21439 1286 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 ICA1Q05084 483 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 SEC23AQ15436 765 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 SLFN13Q68D06 897 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 ANKRD40Q6AI12 368 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 DGKHQ86XP1 1220 aa12.38□□□□□ -0.43
DDR1-239ENST00000452441 UHMK1Q8TAS1 419 aaKnown RBP12.38□□□□□ -0.43
DDR1-239ENST00000452441 E9PMD0 336 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 ERVK-24P63145 666 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 ZSCAN26Q16670 478 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 SYCP3Q8IZU3 236 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 JDP2Q8WYK2 163 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 PYM1Q9BRP8 204 aaKnown RBP12.37□□□□□ -0.43
DDR1-239ENST00000452441 STK32BQ9NY57 414 aa12.37□□□□□ -0.43
DDR1-239ENST00000452441 CWC15Q9P013 229 aaKnown RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms