RNA–Protein interactions for RNA: ENST00000452162.5

PKP4-206, Transcript of plakophilin 4, humanhuman

TSL 1 (best)

Gene PKP4, Length 2,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-206ENST00000452162 USP17L2Q6R6M4 530 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 MLKLQ8NB16 471 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 PROCA1Q8NCQ7 364 aaPredicted RBP12.13□□□□□ -0.47
PKP4-206ENST00000452162 PAGE5Q96GU1 130 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 KIAA1683Q9H0B3 1180 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 CPVLQ9H3G5 476 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 MTMR4Q9NYA4 1195 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 IMPACTQ9P2X3 320 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 SMC2O95347 1197 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 HSPA8P11142 646 aaKnown RBP12.13□□□□□ -0.47
PKP4-206ENST00000452162 TAF1CQ15572 869 aaPredicted RBP12.13□□□□□ -0.47
PKP4-206ENST00000452162 KIAA1755Q5JYT7 1200 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 TMOD4Q9NZQ9 345 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 AGTPBP1Q9UPW5 1226 aa12.13□□□□□ -0.47
PKP4-206ENST00000452162 CCDC194A0A1B0GVG4 234 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 LBX1P52954 281 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 E2F4Q16254 413 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 FILIP1Q7Z7B0 1213 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 ZMYND12Q9H0C1 365 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 ARHGEF10LQ9HCE6 1279 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 TMX2Q9Y320 296 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 CYP2C8P10632 490 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 PDHBP11177 359 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 CTCFP49711 727 aaPredicted RBP12.12□□□□□ -0.47
PKP4-206ENST00000452162 USP14P54578 494 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 GSDMDP57764 484 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 CCZ1BP86790 482 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 CCZ1P86791 482 aaPredicted RBP12.12□□□□□ -0.47
PKP4-206ENST00000452162 RRP36Q96EU6 259 aaKnown RBP12.12□□□□□ -0.47
PKP4-206ENST00000452162 CCDC34Q96HJ3 373 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 CFHR5Q9BXR6 569 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 ZCCHC17Q9NP64 241 aaKnown RBP12.12□□□□□ -0.47
PKP4-206ENST00000452162 DACH1Q9UI36 760 aa12.12□□□□□ -0.47
PKP4-206ENST00000452162 SNHG28P0DPA3 235 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 LONP1P36776 959 aaKnown RBP12.11□□□□□ -0.47
PKP4-206ENST00000452162 DPYDQ12882 1025 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
PKP4-206ENST00000452162 PDXDC2PQ6P474 469 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 ENOX1Q8TC92 643 aaKnown RBP12.11□□□□□ -0.47
PKP4-206ENST00000452162 C12orf42Q96LP6 360 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 RIOX1Q9H6W3 641 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 FANCLQ9NW38 375 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 NYAP2Q9P242 653 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 VCAM1P19320 739 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 AFMP43652 599 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 NAPAP54920 295 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 ASPRV1Q53RT3 343 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 SPICE1Q8N0Z3 855 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 CCDC12Q8WUD4 166 aaPredicted RBP12.11□□□□□ -0.47
PKP4-206ENST00000452162 MED15Q96RN5 788 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 PYM1Q9BRP8 204 aaKnown RBP12.11□□□□□ -0.47
PKP4-206ENST00000452162 ZFYVE28Q9HCC9 887 aa12.11□□□□□ -0.47
PKP4-206ENST00000452162 TTLL1O95922 423 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 INF2Q27J81 1249 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 TMC6Q7Z403 805 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 LRRC47Q8N1G4 583 aaKnown RBP12.1□□□□□ -0.47
PKP4-206ENST00000452162 IQUBQ8NA54 791 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 PIGSQ96S52 555 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 ASCC2Q9H1I8 757 aaPredicted RBP12.1□□□□□ -0.47
PKP4-206ENST00000452162 VCPKMTQ9H867 229 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 SLC45A1Q9Y2W3 748 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 RLFQ13129 1914 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 PARP14Q460N5 1801 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 ESYT2A0FGR8 921 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 GPR25O00155 361 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 CBFA2T2O43439 604 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 RAD21O60216 631 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 ZNF18P17022 549 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 CT47A1Q5JQC4 288 aaPredicted RBP12.1□□□□□ -0.47
PKP4-206ENST00000452162 KRT25Q7Z3Z0 450 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 HOMER1Q86YM7 354 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 MKL1Q969V6 931 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 GSDMAQ96QA5 445 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 PARK7Q99497 189 aaKnown RBP12.1□□□□□ -0.47
PKP4-206ENST00000452162 TMEM60Q9H2L4 133 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 SH2D4AQ9H788 454 aa12.1□□□□□ -0.47
PKP4-206ENST00000452162 SEC63Q9UGP8 760 aaKnown RBP12.1□□□□□ -0.47
PKP4-206ENST00000452162 SMCO2A6NFE2 343 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 hCG_1984214I3L0E3 225 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 TLR2O60603 784 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 SKILP12757 684 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 ERCC5P28715 1186 aaPredicted RBP12.09□□□□□ -0.47
PKP4-206ENST00000452162 CASP1P29466 404 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 HOXA7P31268 230 aaPredicted RBP12.09□□□□□ -0.47
PKP4-206ENST00000452162 UBASH3AP57075 661 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 ARMCX5Q6P1M9 558 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 ZNF713Q8N859 430 aaPredicted RBP12.09□□□□□ -0.47
PKP4-206ENST00000452162 CCDC150Q8NCX0 1101 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 PRIMPOLQ96LW4 560 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 MTRQ99707 1265 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 UBA5Q9GZZ9 404 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 RPAP3Q9H6T3 665 aaPredicted RBP12.09□□□□□ -0.47
PKP4-206ENST00000452162 C6orf50Q9HD87 102 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 CPA4Q9UI42 421 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 FRMPD2Q68DX3 1309 aaPredicted RBP12.09□□□□□ -0.47
PKP4-206ENST00000452162 ADGRA2Q96PE1 1338 aa12.09□□□□□ -0.47
PKP4-206ENST00000452162 UQCRHLA0A096LP55 91 aa12.08□□□□□ -0.47
PKP4-206ENST00000452162 LAD1O00515 517 aa12.08□□□□□ -0.47
PKP4-206ENST00000452162 SERPINC1P01008 464 aa12.08□□□□□ -0.47
PKP4-206ENST00000452162 UQCRHP07919 91 aa12.08□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms