RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 RTN3O95197 1032 aaPredicted RBP10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 EIF4A3P38919 411 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 CDK17Q00537 523 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 ZNF174Q15697 407 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 RTN1Q16799 776 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 KLHDC7AQ5VTJ3 777 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 CWF19L1Q69YN2 538 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 C14orf37Q86TY3 774 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 GPIHBP1Q8IV16 184 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 MFN1Q8IWA4 741 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 SLC12A4Q9UP95 1085 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 H7C1W4 665 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 RAD51CO43502 376 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 GNAT1P11488 350 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 PMS1P54277 932 aaKnown RBP10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 OSBPL1AQ9BXW6 950 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 THAP9Q9H5L6 903 aa10.38□□□□□ -0.75
SYNPO2-204ENST00000448416 ECM29Q5VYK3 1845 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 RASSF10A6NK89 507 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 H0YGN5 161 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 ATP4AP20648 1035 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 KIF5BP33176 963 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 CTCFP49711 727 aaPredicted RBP10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 TNNC1P63316 161 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 KRT71Q3SY84 523 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 LRRC24Q50LG9 513 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 DRAXINQ8NBI3 349 aaPredicted RBP10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 MDM1Q8TC05 714 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 CNKSR1Q969H4 720 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 XPO6Q96QU8 1125 aaKnown RBP10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 INCENPQ9NQS7 918 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 ARHGAP20Q9P2F6 1191 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 NFS1Q9Y697 457 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 A6NHS1 94 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 EVI5O60447 810 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 UPP2O95045 317 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 MTIF2P46199 727 aaKnown RBP10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 ADSSL1Q8N142 457 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 MTRQ99707 1265 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 TMX4Q9H1E5 349 aaPredicted RBP10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 SALL4Q9UJQ4 1053 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 HEG1Q9ULI3 1381 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 BMP15O95972 392 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 NQO1P15559 274 aaKnown RBP10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 LIFRP42702 1097 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 RASSF7Q02833 373 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 TAF11Q15544 211 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 UAP1Q16222 522 aaPredicted RBP10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 PAIP2Q9BPZ3 127 aaKnown RBP10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 SAMD15Q9P1V8 674 aa10.37□□□□□ -0.75
SYNPO2-204ENST00000448416 DCDC2CA8MYV0 355 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 STXBP3O00186 592 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 PSMA7O14818 248 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ZAP70P43403 619 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 KCNJ2P63252 427 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ANKRD20A2Q5SQ80 823 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ANKRD20A1Q5TYW2 823 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ANKRD20A3Q5VUR7 823 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 TRPM8Q7Z2W7 1104 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 SPICE1Q8N0Z3 855 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 MTMR8Q96EF0 704 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ZNF594Q96JF6 807 aaPredicted RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ISCUQ9H1K1 167 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 CNOT10Q9H9A5 744 aaKnown RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 GOLGA6L10A0A0M3HER8 536 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ALDH5A1P51649 535 aaPredicted RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ROR2Q01974 943 aaKnown RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 MAP3K12Q12852 859 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 LAMB3Q13751 1172 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 TBC1D25Q3MII6 688 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 CACNA2D4Q7Z3S7 1137 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ERICH1Q86X53 443 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 CRACR2BQ8N4Y2 399 aaPredicted RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 CSGALNACT2Q8N6G5 542 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ABTB2Q8N961 1025 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 PRCCQ92733 491 aaPredicted RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 PSMD1Q99460 953 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 CEP126Q9P2H0 1117 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 PLAGL2Q9UPG8 496 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 EYA2O00167 538 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 XBP1P17861 261 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ERMARDQ5T6L9 678 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 TRIM68Q6AZZ1 485 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 PDXDC2PQ6P474 469 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ELAC2Q9BQ52 826 aaKnown RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 NOC4LQ9BVI4 516 aaKnown RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 FBXL5Q9UKA1 691 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 PLEKHG1Q9ULL1 1385 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 LRRD1A4D1F6 860 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 MYBL1P10243 752 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ATP2A2P16615 1042 aaKnown RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ABL2P42684 1182 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 MXRA7P84157 204 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 PTGDRQ13258 359 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 ITIH4Q14624 930 aa10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 EARS2Q5JPH6 523 aaKnown RBP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 DDX42Q86XP3 938 aaKnown RBP eCLIP10.36□□□□□ -0.75
SYNPO2-204ENST00000448416 PYM1Q9BRP8 204 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms