RNA–Protein interactions for RNA: ENST00000448087.5

GTF3C3-205, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 1,702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-205ENST00000448087 PAX4O43316 350 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 MSCO60682 206 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 MPOP05164 745 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 SQSTM1Q13501 440 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 STYK1Q6J9G0 422 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 ZNF605Q86T29 641 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 NLRP10Q86W26 655 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 TEX2Q8IWB9 1127 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 PLEKHO2Q8TD55 490 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 RNPC3Q96LT9 517 aaKnown RBP6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 EPB41L4BQ9H329 900 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 KCNK12Q9HB15 430 aa6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 DCP1AQ9NPI6 582 aaPredicted RBP6.63□□□□□ -1.35
GTF3C3-205ENST00000448087 C6orf222P0C671 652 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 GLI4P10075 376 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 FPR2P25090 351 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 RAB3GAP1Q15042 981 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 RSPO2Q6UXX9 243 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 ZNF552Q9H707 407 aaPredicted RBP6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 ASXL2Q76L83 1435 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 C22orf46C9J442 243 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 SRGAP3O43295 1099 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 CYBBP04839 570 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 DBHP09172 617 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 GTF2A2P52657 109 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 RBM10P98175 930 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 LSAMPQ13449 338 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 CEP68Q76N32 757 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 NOP9Q86U38 636 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 CABP7Q86V35 215 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 CHAMP1Q96JM3 812 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 TRAF6Q9Y4K3 522 aa6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 MRPL42Q9Y6G3 142 aaKnown RBP6.62□□□□□ -1.35
GTF3C3-205ENST00000448087 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.61□□□□□ -1.35
GTF3C3-205ENST00000448087 PAQR3Q6TCH7 311 aa6.61□□□□□ -1.35
GTF3C3-205ENST00000448087 RPTNQ6XPR3 784 aa6.61□□□□□ -1.35
GTF3C3-205ENST00000448087 JAZF1Q86VZ6 243 aa6.61□□□□□ -1.35
GTF3C3-205ENST00000448087 Q8N1Y9 231 aa6.61□□□□□ -1.35
GTF3C3-205ENST00000448087 PTPRN2Q92932 1015 aa6.61□□□□□ -1.35
GTF3C3-205ENST00000448087 TMEM169Q96HH4 297 aa6.61□□□□□ -1.35
GTF3C3-205ENST00000448087 ZFYVE21Q9BQ24 234 aa6.61□□□□□ -1.35
GTF3C3-205ENST00000448087 KLHL14Q9P2G3 628 aa6.61□□□□□ -1.35
GTF3C3-205ENST00000448087 CCDC163A0A0D9SF12 145 aa6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 NTRK1P04629 796 aa6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 GPR85P60893 370 aa6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 YBX1P67809 324 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 GABREP78334 506 aa6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 WWC2Q6AWC2 1192 aa6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 LBX2Q6XYB7 198 aa6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 MAMDC2Q7Z304 686 aaPredicted RBP6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 TRMT2BQ96GJ1 504 aaKnown RBP6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 RXFP1Q9HBX9 757 aa6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 TMEM260Q9NX78 707 aa6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 CLDND1Q9NY35 253 aa6.6□□□□□ -1.35
GTF3C3-205ENST00000448087 ESYT3A0FGR9 886 aa6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 ZC3H12DA2A288 527 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 VIPR1P32241 457 aa6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 CBX2Q14781 532 aaPredicted RBP6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 NR1I3Q14994 352 aa6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 PLEKHN1Q494U1 663 aaPredicted RBP6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 OGFOD2Q6N063 350 aa6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 IFNL3Q8IZI9 196 aa6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 FMNL2Q96PY5 1086 aa6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 CDIP1Q9H305 208 aa6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 PPARGC1AQ9UBK2 798 aaKnown RBP6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 HCFC2Q9Y5Z7 792 aa6.59□□□□□ -1.35
GTF3C3-205ENST00000448087 MYOCOSA0A1B0GUC4 107 aa6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 F8W031 263 aaPredicted RBP6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 H7BY64 318 aa6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 HRKO00198 91 aa6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 ABLIM1O14639 778 aa6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 MESP2Q0VG99 397 aa6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 GIMAP6Q6P9H5 292 aa6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 NETO2Q8NC67 525 aa6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 FBXO15Q8NCQ5 510 aaPredicted RBP6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 MCOLN1Q9GZU1 580 aa6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 X6R8D5 127 aa6.59□□□□□ -1.36
GTF3C3-205ENST00000448087 AQP7O14520 342 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 PEX10O60683 326 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 MAPKAPK2P49137 400 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 SRSF3P84103 164 aaKnown RBP6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 TMEM62Q0P6H9 643 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 KIZQ2M2Z5 673 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 RIOX2Q8IUF8 465 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 KRTAP9-2Q9BYQ4 174 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 SLC52A2Q9HAB3 445 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 NCOA5Q9HCD5 579 aaKnown RBP6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 NDOR1Q9UHB4 597 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 DBR1Q9UK59 544 aaKnown RBP6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 COA3Q9Y2R0 106 aaPredicted RBP6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 SIT1Q9Y3P8 196 aa6.58□□□□□ -1.36
GTF3C3-205ENST00000448087 FARP2O94887 1054 aaPredicted RBP6.57□□□□□ -1.36
GTF3C3-205ENST00000448087 GRK2P25098 689 aa6.57□□□□□ -1.36
GTF3C3-205ENST00000448087 GRK3P35626 688 aa6.57□□□□□ -1.36
GTF3C3-205ENST00000448087 PRR5P85299 388 aa6.57□□□□□ -1.36
GTF3C3-205ENST00000448087 MROH9Q5TGP6 573 aa6.57□□□□□ -1.36
GTF3C3-205ENST00000448087 OLFML2BQ68BL8 750 aa6.57□□□□□ -1.36
GTF3C3-205ENST00000448087 ZC3H14Q6PJT7 736 aaKnown RBP6.57□□□□□ -1.36
GTF3C3-205ENST00000448087 TMC6Q7Z403 805 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms