RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 XP32Q5T750 250 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 ZSWIM9Q86XI8 627 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 NUP43Q8NFH3 380 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 SLC7A14Q8TBB6 771 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 PLEKHO2Q8TD55 490 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 APPBP2Q92624 585 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 IPO9Q96P70 1041 aaKnown RBP6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 SLC52A2Q9HAB3 445 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 PDLIM7Q9NR12 457 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 GULP1Q9UBP9 304 aa6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 TIMM13Q9Y5L4 95 aaPredicted RBP6.41□□□□□ -1.38
HMGB1P48-201ENST00000446155 CDC45O75419 566 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 RFPL3O75679 317 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 GLI1P08151 1106 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 GALK1P51570 392 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 ERVFRD-1P60508 538 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 GPR85P60893 370 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 RPL11P62913 178 aaKnown RBP6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 CBX2Q14781 532 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 FNDC3BQ53EP0 1204 aaKnown RBP6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 LBX2Q6XYB7 198 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 CLUHP3Q96NS8 147 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 TRIM39Q9HCM9 518 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 TRAF6Q9Y4K3 522 aa6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.4□□□□□ -1.38
HMGB1P48-201ENST00000446155 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 ZNF503-AS2A6NEH8 195 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 SRGAP3O43295 1099 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 ASMTLO95671 621 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 HSD3B2P26439 372 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 BCL6P41182 706 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 GTF2A2P52657 109 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 CYP4F8P98187 520 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 TCEA2Q15560 299 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 SCLYQ96I15 445 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 RWDD3Q9Y3V2 267 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 PCDHA2Q9Y5H9 948 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 X6R8D5 127 aa6.39□□□□□ -1.39
HMGB1P48-201ENST00000446155 EFCAB14O75071 495 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 RAPGEF3O95398 923 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 GLI4P10075 376 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 TAL1P17542 331 aaPredicted RBP6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 LSAMPQ13449 338 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 KCNMB1Q16558 191 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 BRAPQ7Z569 592 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 IRF2BP1Q8IU81 584 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 IFNL3Q8IZI9 196 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 LZTR1Q8N653 840 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 FAM168AQ92567 244 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 INTS4Q96HW7 963 aaKnown RBP6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 FEZ1Q99689 392 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 PPARGC1AQ9UBK2 798 aaKnown RBP6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 SFMBT1Q9UHJ3 866 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 CD2APQ9Y5K6 639 aa6.38□□□□□ -1.39
HMGB1P48-201ENST00000446155 H7BY64 318 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 ARVCFO00192 962 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 AQP7O14520 342 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 WNT9AO14904 365 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 MYO1BO43795 1136 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 FPR2P25090 351 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 EGFLAMQ63HQ2 1017 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 RIOX2Q8IUF8 465 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 TEX2Q8IWB9 1127 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 CHMP4AQ9BY43 222 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 SLC6A17Q9H1V8 727 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 MARCH2Q9P0N8 246 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 NDOR1Q9UHB4 597 aa6.37□□□□□ -1.39
HMGB1P48-201ENST00000446155 DBHP09172 617 aa6.36□□□□□ -1.39
HMGB1P48-201ENST00000446155 TACR1P25103 407 aa6.36□□□□□ -1.39
HMGB1P48-201ENST00000446155 PABPC4Q13310 644 aaKnown RBP eCLIP6.36□□□□□ -1.39
HMGB1P48-201ENST00000446155 KIZQ2M2Z5 673 aa6.36□□□□□ -1.39
HMGB1P48-201ENST00000446155 MCTP1Q6DN14 999 aa6.36□□□□□ -1.39
HMGB1P48-201ENST00000446155 ZNF662Q6ZS27 426 aa6.36□□□□□ -1.39
HMGB1P48-201ENST00000446155 FGD2Q7Z6J4 655 aa6.36□□□□□ -1.39
HMGB1P48-201ENST00000446155 SIRT2Q8IXJ6 389 aa6.36□□□□□ -1.39
HMGB1P48-201ENST00000446155 C22orf46C9J442 243 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 DNAJC8O75937 253 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 RASGRP1O95267 797 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 CRTAMO95727 393 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 FUCA1P04066 466 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 ARL4AP40617 200 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 YBX1P67809 324 aaKnown RBP6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 HABP4Q5JVS0 413 aaKnown RBP6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 WWC2Q6AWC2 1192 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 CEP68Q76N32 757 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 NETO2Q8NC67 525 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 PCDH19Q8TAB3 1148 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 LIN37Q96GY3 246 aaPredicted RBP6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 TMEM169Q96HH4 297 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 PCDHA9Q9Y5H5 950 aa6.35□□□□□ -1.39
HMGB1P48-201ENST00000446155 A0A1W2PQ27 194 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 A0A1W2PQ64 194 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 A0A1W2PQC6 194 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 A0A1W2PQD8 194 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 TCRBV16S1A1N1A0A5B0 115 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 FAM83GA6ND36 823 aa6.34□□□□□ -1.39
HMGB1P48-201ENST00000446155 HRKO00198 91 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms