RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 CRYGNQ8WXF5 182 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 LARP4BQ92615 738 aaKnown RBP17.6■□□□□ 0.41
SNX13-204ENST00000444712 LPAR1Q92633 364 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 MED15Q96RN5 788 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 PLIN2Q99541 437 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 KCNMB3Q9NPA1 279 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 SAMSN1Q9NSI8 373 aaKnown RBP17.6■□□□□ 0.41
SNX13-204ENST00000444712 EXOC1Q9NV70 894 aa17.6■□□□□ 0.41
SNX13-204ENST00000444712 MRPL11Q9Y3B7 192 aaKnown RBP17.6■□□□□ 0.41
SNX13-204ENST00000444712 PSMA7O14818 248 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 KLRC4O43908 158 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 KCNJ6P48051 423 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 GRB10Q13322 594 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 Q4G0T1 1027 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 SMYD4Q8IYR2 804 aaPredicted RBP17.59■□□□□ 0.41
SNX13-204ENST00000444712 GIMAP8Q8ND71 665 aaPredicted RBP17.59■□□□□ 0.41
SNX13-204ENST00000444712 NELFBQ8WX92 580 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 HAS1Q92839 578 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 FEZ1Q99689 392 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 CNOT7Q9UIV1 285 aaKnown RBP17.59■□□□□ 0.41
SNX13-204ENST00000444712 ABCB11O95342 1321 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 A0A1B0GTH6 734 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 PHF20L1A8MW92 1017 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 CTNND1O60716 968 aaKnown RBP17.59■□□□□ 0.41
SNX13-204ENST00000444712 PTGER2P43116 358 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 STX17P56962 302 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 ASIC1P78348 528 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 CCZ1BP86790 482 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 CCZ1P86791 482 aaPredicted RBP17.59■□□□□ 0.41
SNX13-204ENST00000444712 TMEM119Q4V9L6 283 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 COBLL1Q53SF7 1204 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 HYIQ5T013 277 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 DCAF15Q66K64 600 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 CNNM4Q6P4Q7 775 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 CDAN1Q8IWY9 1227 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 ADSSL1Q8N142 457 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 DHTKD1Q96HY7 919 aaPredicted RBP17.59■□□□□ 0.41
SNX13-204ENST00000444712 TEPSINQ96N21 525 aa17.59■□□□□ 0.41
SNX13-204ENST00000444712 NAP1L5Q96NT1 182 aaPredicted RBP17.59■□□□□ 0.41
SNX13-204ENST00000444712 RBBP6Q7Z6E9 1792 aaKnown RBP17.58■□□□□ 0.4
SNX13-204ENST00000444712 PVALEFA0A1B0GWK0 134 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 POTEMA6NI47 508 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 H7C1D1 291 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 WDR46O15213 610 aaKnown RBP17.58■□□□□ 0.4
SNX13-204ENST00000444712 CYP3A4P08684 503 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 CIITAP33076 1130 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 RASSF7Q02833 373 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 KIF4BQ2VIQ3 1234 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 RAD54LQ92698 747 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 FAM20AQ96MK3 541 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 GJA3Q9Y6H8 435 aa17.58■□□□□ 0.4
SNX13-204ENST00000444712 SHTN1A0MZ66 631 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 PRCPP42785 496 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 SNAP25P60880 206 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 KIAA1755Q5JYT7 1200 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 HAUS3Q68CZ6 603 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 SPECC1LQ69YQ0 1117 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 APOBEC3FQ8IUX4 373 aaKnown RBP17.57■□□□□ 0.4
SNX13-204ENST00000444712 NOC3LQ8WTT2 800 aaKnown RBP17.57■□□□□ 0.4
SNX13-204ENST00000444712 KIFC2Q96AC6 838 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 PNMA5Q96PV4 448 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 KCND1Q9NSA2 647 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 PNMA2Q9UL42 364 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 BICDL2A1A5D9 508 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 PDE4DQ08499 809 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 NR1I3Q14994 352 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 ERMNQ8TAM6 284 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 KIAA1683Q9H0B3 1180 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 BLOC1S4Q9NUP1 217 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 HACL1Q9UJ83 578 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 GDAQ9Y2T3 454 aa17.57■□□□□ 0.4
SNX13-204ENST00000444712 GCOM1H8Y6P7 765 aaPredicted RBP17.56■□□□□ 0.4
SNX13-204ENST00000444712 POLR2MP0CAP2 368 aa17.56■□□□□ 0.4
SNX13-204ENST00000444712 ARMCX5Q6P1M9 558 aa17.56■□□□□ 0.4
SNX13-204ENST00000444712 UNC13DQ70J99 1090 aa17.56■□□□□ 0.4
SNX13-204ENST00000444712 LRRC15Q8TF66 581 aa17.56■□□□□ 0.4
SNX13-204ENST00000444712 ZNF341Q9BYN7 854 aa17.56■□□□□ 0.4
SNX13-204ENST00000444712 LIMA1Q9UHB6 759 aaKnown RBP17.56■□□□□ 0.4
SNX13-204ENST00000444712 RABGAP1Q9Y3P9 1069 aa17.56■□□□□ 0.4
SNX13-204ENST00000444712 OPLAHO14841 1288 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 ARID5BQ14865 1188 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 ZYXQ15942 572 aaKnown RBP17.55■□□□□ 0.4
SNX13-204ENST00000444712 C17orf53Q8N3J3 647 aaPredicted RBP17.55■□□□□ 0.4
SNX13-204ENST00000444712 INTS13Q9NVM9 706 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 CCP110O43303 1012 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 ZNF76P36508 570 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 CCT6AP40227 531 aaKnown RBP17.55■□□□□ 0.4
SNX13-204ENST00000444712 USP14P54578 494 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 PSMD2Q13200 908 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 TBC1D10BQ4KMP7 808 aaPredicted RBP17.55■□□□□ 0.4
SNX13-204ENST00000444712 HSP90AA4PQ58FG1 418 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 SAMD7Q7Z3H4 446 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 KCTD17Q8N5Z5 321 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 ETNPPLQ8TBG4 499 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 DEFB129Q9H1M3 183 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 THAP9Q9H5L6 903 aa17.55■□□□□ 0.4
SNX13-204ENST00000444712 BMP2KQ9NSY1 1161 aaPredicted RBP17.55■□□□□ 0.4
SNX13-204ENST00000444712 ADD3Q9UEY8 706 aaKnown RBP17.55■□□□□ 0.4
SNX13-204ENST00000444712 TBX2Q13207 712 aaPredicted RBP17.54■□□□□ 0.4
SNX13-204ENST00000444712 MCM6Q14566 821 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms