RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 HINFPQ9BQA5 517 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 SLF1Q9BQI6 1058 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 SNRKQ9NRH2 765 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 TANC1Q9C0D5 1861 aa12.37□□□□□ -0.43
HDAC8-215ENST00000444609 CKBP12277 381 aa12.36□□□□□ -0.43
HDAC8-215ENST00000444609 FBXO16Q8IX29 292 aaPredicted RBP12.36□□□□□ -0.43
HDAC8-215ENST00000444609 MIGA1Q8NAN2 632 aa12.36□□□□□ -0.43
HDAC8-215ENST00000444609 SUSD6Q92537 303 aa12.36□□□□□ -0.43
HDAC8-215ENST00000444609 TOP1MTQ969P6 601 aa12.36□□□□□ -0.43
HDAC8-215ENST00000444609 C11orf84Q9BUA3 381 aaPredicted RBP12.36□□□□□ -0.43
HDAC8-215ENST00000444609 RAVER2Q9HCJ3 691 aaKnown RBP12.36□□□□□ -0.43
HDAC8-215ENST00000444609 DDX49Q9Y6V7 483 aaKnown RBP12.36□□□□□ -0.43
HDAC8-215ENST00000444609 SETXQ7Z333 2677 aaKnown RBP12.36□□□□□ -0.43
HDAC8-215ENST00000444609 FOCADQ5VW36 1801 aa12.36□□□□□ -0.43
HDAC8-215ENST00000444609 KPNA6O60684 536 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 ZBED4O75132 1171 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 LGR5O75473 907 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 BRD1O95696 1058 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 CYP2E1P05181 493 aaPredicted RBP12.35□□□□□ -0.43
HDAC8-215ENST00000444609 EEF2P13639 858 aaKnown RBP12.35□□□□□ -0.43
HDAC8-215ENST00000444609 AKR1B1P15121 316 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 CTNNB1P35222 781 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 BMPR1AP36894 532 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 MTMR3Q13615 1198 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 CCDC105Q8IYK2 499 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 PRPF38AQ8NAV1 312 aaKnown RBP12.35□□□□□ -0.43
HDAC8-215ENST00000444609 SORCS3Q9UPU3 1222 aa12.35□□□□□ -0.43
HDAC8-215ENST00000444609 MMP1P03956 469 aa12.34□□□□□ -0.43
HDAC8-215ENST00000444609 CAMK1Q14012 370 aa12.34□□□□□ -0.43
HDAC8-215ENST00000444609 COL9A3Q14050 684 aaPredicted RBP12.34□□□□□ -0.43
HDAC8-215ENST00000444609 MBTPS1Q14703 1052 aa12.34□□□□□ -0.43
HDAC8-215ENST00000444609 GDF6Q6KF10 455 aaPredicted RBP12.34□□□□□ -0.43
HDAC8-215ENST00000444609 TRAF7Q6Q0C0 670 aa12.34□□□□□ -0.43
HDAC8-215ENST00000444609 MFSD1Q9H3U5 465 aa12.34□□□□□ -0.43
HDAC8-215ENST00000444609 GOPCQ9HD26 462 aa12.34□□□□□ -0.43
HDAC8-215ENST00000444609 VTA1Q9NP79 307 aa12.34□□□□□ -0.43
HDAC8-215ENST00000444609 BARX2Q9UMQ3 279 aaPredicted RBP12.34□□□□□ -0.43
HDAC8-215ENST00000444609 R4GN57 208 aa12.34□□□□□ -0.43
HDAC8-215ENST00000444609 PARP14Q460N5 1801 aa12.34□□□□□ -0.43
HDAC8-215ENST00000444609 MCM3APO60318 1980 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 PI15O43692 258 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 GLP2RO95838 553 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 LINC00271P0C7V0 271 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 SESTD1Q86VW0 696 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 FIBCD1Q8N539 461 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 DTWD2Q8NBA8 298 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 DBF4BQ8NFT6 615 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 CCER1Q8TC90 406 aaPredicted RBP12.33□□□□□ -0.44
HDAC8-215ENST00000444609 PPP2R3CQ969Q6 453 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 WDR11Q9BZH6 1224 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 SLC38A10Q9HBR0 1119 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 A1CFQ9NQ94 594 aaKnown RBP12.33□□□□□ -0.44
HDAC8-215ENST00000444609 SWAP70Q9UH65 585 aa12.33□□□□□ -0.44
HDAC8-215ENST00000444609 OTOGLQ3ZCN5 2332 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 DCDC2BA2VCK2 349 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 A6NJR5 290 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 SOBPA7XYQ1 873 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 UPP2O95045 317 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 ARP10275 920 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 AOC1P19801 751 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 OAZ1P54368 228 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 BRDTQ58F21 947 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-215ENST00000444609 CWF19L1Q69YN2 538 aaKnown RBP12.32□□□□□ -0.44
HDAC8-215ENST00000444609 ADGRD2Q7Z7M1 963 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 OR6J1Q8NGC5 347 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 MORC4Q8TE76 937 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 NUP88Q99567 741 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-215ENST00000444609 SMOC2Q9H3U7 446 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 KANSL2Q9H9L4 492 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 PIH1D3Q9NQM4 214 aaKnown RBP12.32□□□□□ -0.44
HDAC8-215ENST00000444609 COG6Q9Y2V7 657 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 RWDD3Q9Y3V2 267 aa12.32□□□□□ -0.44
HDAC8-215ENST00000444609 CTDP1Q9Y5B0 961 aaPredicted RBP12.32□□□□□ -0.44
HDAC8-215ENST00000444609 RAD21O60216 631 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 CSPG5O95196 566 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 DMWDQ09019 674 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 ZNF618Q5T7W0 954 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 FLCNQ8NFG4 579 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 IL17RAQ96F46 866 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 CCDC17Q96LX7 622 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 ACAD9Q9H845 621 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 HOMER2Q9NSB8 354 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 MCM9Q9NXL9 1143 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 FRYLO94915 3013 aa12.31□□□□□ -0.44
HDAC8-215ENST00000444609 SCN10AQ9Y5Y9 1956 aa12.3□□□□□ -0.44
HDAC8-215ENST00000444609 RBM47A0AV96 593 aaKnown RBP12.3□□□□□ -0.44
HDAC8-215ENST00000444609 E9PSI1 815 aa12.3□□□□□ -0.44
HDAC8-215ENST00000444609 UBTFL1P0CB47 393 aaPredicted RBP12.3□□□□□ -0.44
HDAC8-215ENST00000444609 NPR3P17342 541 aa12.3□□□□□ -0.44
HDAC8-215ENST00000444609 NRIP1P48552 1158 aa12.3□□□□□ -0.44
HDAC8-215ENST00000444609 CHMP4BP1P59074 171 aa12.3□□□□□ -0.44
HDAC8-215ENST00000444609 TRIM71Q2Q1W2 868 aaKnown RBP12.3□□□□□ -0.44
HDAC8-215ENST00000444609 DYNLL2Q96FJ2 89 aa12.3□□□□□ -0.44
HDAC8-215ENST00000444609 RTKNQ9BST9 563 aa12.3□□□□□ -0.44
HDAC8-215ENST00000444609 PLAGL2Q9UPG8 496 aa12.3□□□□□ -0.44
HDAC8-215ENST00000444609 MYH1P12882 1939 aa12.3□□□□□ -0.44
HDAC8-215ENST00000444609 PRR5-ARHGAP8B1AHC4 643 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 CYP2D6P10635 497 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 DNAJB1P25685 340 aa12.29□□□□□ -0.44
HDAC8-215ENST00000444609 ZAP70P43403 619 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms