RNA–Protein interactions for RNA: ENST00000443617.6

HERC1-201, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERC1, Length 15,137 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-201ENST00000443617 CIAO1O76071 339 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 IFNAR1P17181 557 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 PTGDRQ13258 359 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 NAB2Q15742 525 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ARHGAP22Q7Z5H3 698 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 WDR66Q8TBY9 1149 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.5□□□□□ -1.53
HERC1-201ENST00000443617 BMP2KQ9NSY1 1161 aaPredicted RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 ARL2BPQ9Y2Y0 163 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 NEDD4P46934 1319 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 CCDC194A0A1B0GVG4 234 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 HGSO14964 777 aaPredicted RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 MAP3K12Q12852 859 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 CCDC152Q4G0S7 254 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 FAM81AQ8TBF8 368 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 CCDC85AQ96PX6 553 aaPredicted RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 FAM114A2Q9NRY5 505 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 TRAPPC10P48553 1259 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 CTDSPL2Q05D32 466 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 AKAP4Q5JQC9 854 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 PARD3BQ8TEW8 1205 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 EIF4E1BA6NMX2 242 aaKnown RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 MEA1Q16626 185 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 KAZALD1Q96I82 304 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 FAM129AQ9BZQ8 928 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ATP8A1Q9Y2Q0 1164 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ADGRB2O60241 1585 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 GCLCP48506 637 aaPredicted RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 RAD23BP54727 409 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ASIC2Q16515 512 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 HHATQ5VTY9 493 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 CEP128Q6ZU80 1094 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 CTTNBP2NLQ9P2B4 639 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ZNF609O15014 1411 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 UTYO14607 1347 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ZC3H4Q9UPT8 1303 aaKnown RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 CETN3O15182 167 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 PDE6AP16499 860 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 SESN3P58005 492 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 MAP7Q14244 749 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 EMC10Q5UCC4 262 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 DZIP3Q86Y13 1208 aaKnown RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 TBC1D10CQ8IV04 446 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 LSM14BQ9BX40 385 aaKnown RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 CNNM1Q9NRU3 951 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 CD2APQ9Y5K6 639 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 IGSF1Q8N6C5 1336 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 PPIP5K2O43314 1243 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ROR2Q01974 943 aaKnown RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 GFPT1Q06210 699 aaPredicted RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 ZNF572Q7Z3I7 529 aaPredicted RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 TATDN2Q93075 761 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 EME2A4GXA9 379 aaPredicted RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 E7ENQ6 273 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 RASGRF2O14827 1237 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 GNAT2P19087 354 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 KLK7P49862 253 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 IP6K1Q92551 441 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 LY9Q9HBG7 655 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 PGRMC1O00264 195 aaKnown RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 PFDN1O60925 122 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 UBE4AQ14139 1066 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 ANKIB1Q9P2G1 1089 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 MTRF1LQ9UGC7 380 aaKnown RBP5.5□□□□□ -1.53
HERC1-201ENST00000443617 L3MBTL1Q9Y468 752 aa5.5□□□□□ -1.53
HERC1-201ENST00000443617 UGGT1Q9NYU2 1555 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 USH1CQ9Y6N9 552 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 SKIP12755 728 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 ALX1Q15699 326 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 THEMIS2Q5TEJ8 643 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 C6orf89Q6UWU4 347 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 USP15Q9Y4E8 981 aaPredicted RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 SYCE1Q8N0S2 351 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 ZNF594Q96JF6 807 aaPredicted RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 ABCC3O15438 1527 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 RAPGEF1Q13905 1077 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 DTHD1Q6ZMT9 781 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 DDX23Q9BUQ8 820 aaKnown RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 AZI2Q9H6S1 392 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 RAD51CO43502 376 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 INTS8Q75QN2 995 aaKnown RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 APTXQ7Z2E3 356 aaKnown RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 FAM192AQ9GZU8 254 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.49□□□□□ -1.53
HERC1-201ENST00000443617 CLTCL1P53675 1640 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 RANBP6O60518 1105 aaKnown RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 CCT6BQ92526 530 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 CCDC77Q9BR77 488 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 SENP2Q9HC62 589 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 FGFR1OP2Q9NVK5 253 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 NPHP4O75161 1426 aaPredicted RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 IRF6O14896 467 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 PLEKP08567 350 aaPredicted RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 PPP2R5BQ15173 497 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 TRADDQ15628 312 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 TAOK1Q7L7X3 1001 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 LARSQ9P2J5 1176 aaKnown RBP5.49□□□□□ -1.53
HERC1-201ENST00000443617 STK36Q9NRP7 1315 aa5.49□□□□□ -1.53
HERC1-201ENST00000443617 PHLDB3Q6NSJ2 640 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms