RNA–Protein interactions for RNA: ENST00000441728.6

UBE2F-215, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,242 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-215ENST00000441728 VCANP13611 3396 aa23.39■■□□□ 1.34
UBE2F-215ENST00000441728 A0A0D9SFI3 127 aa23.39■■□□□ 1.33
UBE2F-215ENST00000441728 HSPD1P10809 573 aaKnown RBP23.39■■□□□ 1.33
UBE2F-215ENST00000441728 PDE1AP54750 535 aa23.39■■□□□ 1.33
UBE2F-215ENST00000441728 PTPN11Q06124 597 aaPredicted RBP23.39■■□□□ 1.33
UBE2F-215ENST00000441728 GPATCH4Q5T3I0 446 aaKnown RBP23.39■■□□□ 1.33
UBE2F-215ENST00000441728 ESR2Q92731 530 aa23.39■■□□□ 1.33
UBE2F-215ENST00000441728 RILPL2Q969X0 211 aa23.39■■□□□ 1.33
UBE2F-215ENST00000441728 PITPNM1O00562 1244 aa23.38■■□□□ 1.33
UBE2F-215ENST00000441728 CA3P07451 260 aa23.38■■□□□ 1.33
UBE2F-215ENST00000441728 KCNJ6P48051 423 aa23.38■■□□□ 1.33
UBE2F-215ENST00000441728 ZMYM6O95789 1325 aa23.37■■□□□ 1.33
UBE2F-215ENST00000441728 CCDC171Q6TFL3 1326 aa23.37■■□□□ 1.33
UBE2F-215ENST00000441728 SALL3Q9BXA9 1300 aa23.37■■□□□ 1.33
UBE2F-215ENST00000441728 DHX16O60231 1041 aaKnown RBP23.37■■□□□ 1.33
UBE2F-215ENST00000441728 NMIQ13287 307 aaPredicted RBP23.37■■□□□ 1.33
UBE2F-215ENST00000441728 TICAM2Q86XR7 235 aa23.37■■□□□ 1.33
UBE2F-215ENST00000441728 PHOSPHO2Q8TCD6 241 aa23.37■■□□□ 1.33
UBE2F-215ENST00000441728 COPS5Q92905 334 aa23.37■■□□□ 1.33
UBE2F-215ENST00000441728 CERS4Q9HA82 394 aa23.37■■□□□ 1.33
UBE2F-215ENST00000441728 A6NJR5 290 aa23.36■■□□□ 1.33
UBE2F-215ENST00000441728 IQCF3P0C7M6 154 aa23.36■■□□□ 1.33
UBE2F-215ENST00000441728 CCDC178Q5BJE1 867 aa23.36■■□□□ 1.33
UBE2F-215ENST00000441728 IQCA1Q86XH1 822 aa23.36■■□□□ 1.33
UBE2F-215ENST00000441728 PPP1R13LQ8WUF5 828 aa23.36■■□□□ 1.33
UBE2F-215ENST00000441728 ZNF213O14771 459 aa23.35■■□□□ 1.33
UBE2F-215ENST00000441728 GOLGA8HP0CJ92 632 aa23.35■■□□□ 1.33
UBE2F-215ENST00000441728 EDNRBP24530 442 aa23.35■■□□□ 1.33
UBE2F-215ENST00000441728 PTGISQ16647 500 aa23.35■■□□□ 1.33
UBE2F-215ENST00000441728 ARNTL2Q8WYA1 636 aa23.35■■□□□ 1.33
UBE2F-215ENST00000441728 ZKSCAN3Q9BRR0 538 aa23.35■■□□□ 1.33
UBE2F-215ENST00000441728 KAT14Q9H8E8 782 aa23.35■■□□□ 1.33
UBE2F-215ENST00000441728 ABCB11O95342 1321 aa23.34■■□□□ 1.33
UBE2F-215ENST00000441728 GH1P01241 217 aa23.34■■□□□ 1.33
UBE2F-215ENST00000441728 SEPT14Q6ZU15 432 aa23.34■■□□□ 1.33
UBE2F-215ENST00000441728 CHST3Q7LGC8 479 aa23.34■■□□□ 1.33
UBE2F-215ENST00000441728 ZNF589Q86UQ0 364 aaPredicted RBP23.34■■□□□ 1.33
UBE2F-215ENST00000441728 MCF2L2Q86YR7 1114 aa23.34■■□□□ 1.33
UBE2F-215ENST00000441728 ZBED2Q9BTP6 218 aa23.34■■□□□ 1.33
UBE2F-215ENST00000441728 UBA5Q9GZZ9 404 aa23.34■■□□□ 1.33
UBE2F-215ENST00000441728 TTC28Q96AY4 2481 aa23.34■■□□□ 1.33
UBE2F-215ENST00000441728 RFXAPO00287 272 aa23.33■■□□□ 1.33
UBE2F-215ENST00000441728 BAIAP3O94812 1187 aa23.33■■□□□ 1.33
UBE2F-215ENST00000441728 SNHG28P0DPA3 235 aa23.33■■□□□ 1.33
UBE2F-215ENST00000441728 CASTP20810 708 aaKnown RBP23.33■■□□□ 1.33
UBE2F-215ENST00000441728 RRP1P56182 461 aaKnown RBP23.33■■□□□ 1.33
UBE2F-215ENST00000441728 CDC37Q16543 378 aaPredicted RBP23.33■■□□□ 1.33
UBE2F-215ENST00000441728 HERC6Q8IVU3 1022 aa23.33■■□□□ 1.33
UBE2F-215ENST00000441728 RGS22Q8NE09 1264 aa23.33■■□□□ 1.33
UBE2F-215ENST00000441728 CAGE1Q8TC20 777 aa23.33■■□□□ 1.33
UBE2F-215ENST00000441728 NSUN6Q8TEA1 469 aaKnown RBP23.33■■□□□ 1.33
UBE2F-215ENST00000441728 SCN5AQ14524 2016 aa23.33■■□□□ 1.32
UBE2F-215ENST00000441728 SCN10AQ9Y5Y9 1956 aa23.32■■□□□ 1.32
UBE2F-215ENST00000441728 TLL1O43897 1013 aa23.32■■□□□ 1.32
UBE2F-215ENST00000441728 NT5C2P49902 561 aa23.32■■□□□ 1.32
UBE2F-215ENST00000441728 STXBP2Q15833 593 aa23.32■■□□□ 1.32
UBE2F-215ENST00000441728 DGKHQ86XP1 1220 aa23.32■■□□□ 1.32
UBE2F-215ENST00000441728 TBC1D10CQ8IV04 446 aa23.32■■□□□ 1.32
UBE2F-215ENST00000441728 PNMA1Q8ND90 353 aa23.32■■□□□ 1.32
UBE2F-215ENST00000441728 AFAP1L1Q8TED9 768 aa23.32■■□□□ 1.32
UBE2F-215ENST00000441728 AFG1LQ8WV93 481 aa23.32■■□□□ 1.32
UBE2F-215ENST00000441728 ARHGEF16Q5VV41 709 aa23.31■■□□□ 1.32
UBE2F-215ENST00000441728 VWCEQ96DN2 955 aa23.31■■□□□ 1.32
UBE2F-215ENST00000441728 CRBNQ96SW2 442 aa23.31■■□□□ 1.32
UBE2F-215ENST00000441728 LNPKQ9C0E8 428 aa23.31■■□□□ 1.32
UBE2F-215ENST00000441728 MAF1Q9H063 256 aa23.31■■□□□ 1.32
UBE2F-215ENST00000441728 MRPL11Q9Y3B7 192 aaKnown RBP23.31■■□□□ 1.32
UBE2F-215ENST00000441728 MTCH2Q9Y6C9 303 aa23.31■■□□□ 1.32
UBE2F-215ENST00000441728 TANC1Q9C0D5 1861 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 ARIH2O95376 493 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 PARNO95453 639 aaKnown RBP23.3■■□□□ 1.32
UBE2F-215ENST00000441728 MMP3P08254 477 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 TFF2Q03403 129 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 LY6KQ17RY6 165 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 ASPRV1Q53RT3 343 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 C7orf31Q8N865 590 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 IWS1Q96ST2 819 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 RMDN3Q96TC7 470 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 KATNAL1Q9BW62 490 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 CPVLQ9H3G5 476 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 DIAPH3Q9NSV4 1193 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 COG5Q9UP83 839 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 NEDD4P46934 1319 aa23.3■■□□□ 1.32
UBE2F-215ENST00000441728 TAP1Q03518 808 aa23.29■■□□□ 1.32
UBE2F-215ENST00000441728 HDAC1Q13547 482 aaPredicted RBP23.29■■□□□ 1.32
UBE2F-215ENST00000441728 DGKDQ16760 1214 aa23.29■■□□□ 1.32
UBE2F-215ENST00000441728 LRRC8DQ7L1W4 858 aa23.29■■□□□ 1.32
UBE2F-215ENST00000441728 FBXO11Q86XK2 927 aa23.29■■□□□ 1.32
UBE2F-215ENST00000441728 TAAR1Q96RJ0 339 aa23.29■■□□□ 1.32
UBE2F-215ENST00000441728 KDM4AO75164 1064 aa23.28■■□□□ 1.32
UBE2F-215ENST00000441728 PARP1P09874 1014 aaKnown RBP23.28■■□□□ 1.32
UBE2F-215ENST00000441728 SELPP16109 830 aa23.28■■□□□ 1.32
UBE2F-215ENST00000441728 POU3F3P20264 500 aaPredicted RBP23.28■■□□□ 1.32
UBE2F-215ENST00000441728 ADGRF4Q8IZF3 695 aa23.28■■□□□ 1.32
UBE2F-215ENST00000441728 SYTL5Q8TDW5 730 aaPredicted RBP23.28■■□□□ 1.32
UBE2F-215ENST00000441728 NECAB3Q96P71 396 aaPredicted RBP23.28■■□□□ 1.32
UBE2F-215ENST00000441728 C1QTNF1Q9BXJ1 281 aa23.28■■□□□ 1.32
UBE2F-215ENST00000441728 VAT1LQ9HCJ6 419 aa23.28■■□□□ 1.32
UBE2F-215ENST00000441728 MRVI1Q9Y6F6 885 aa23.28■■□□□ 1.32
UBE2F-215ENST00000441728 SPTBN5Q9NRC6 3674 aaKnown RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms