RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 PROSER3Q2NL68 480 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 IER5Q5VY09 327 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 ELMSAN1Q6PJG2 1045 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 ZDHHC13Q8IUH4 622 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 ANKMY2Q8IV38 441 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 ZBTB38Q8NAP3 1195 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-206ENST00000441089 PANK1Q8TE04 598 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 PPM1EQ8WY54 764 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 FRAT1Q92837 279 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-206ENST00000441089 PRMT6Q96LA8 375 aaPredicted RBP5.96□□□□□ -1.46
PTPN4-206ENST00000441089 CRBNQ96SW2 442 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 VRTNQ9H8Y1 702 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 SEC31BQ9NQW1 1179 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 KLK14Q9P0G3 267 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 USP20Q9Y2K6 914 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 LEMD3Q9Y2U8 911 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 SNCAIPQ9Y6H5 919 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 FRMPD3Q5JV73 1810 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 PLXNA1Q9UIW2 1896 aa5.96□□□□□ -1.46
PTPN4-206ENST00000441089 PTPRFP10586 1907 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 TGFBR3LH3BV60 316 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 SMIM22K7EJ46 135 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 SASH3O75995 380 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 FKBP1AP62942 108 aaKnown RBP5.95□□□□□ -1.46
PTPN4-206ENST00000441089 NHLH1Q02575 133 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 DPYDQ12882 1025 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 AIMP1Q12904 312 aaKnown RBP5.95□□□□□ -1.46
PTPN4-206ENST00000441089 PDE3AQ14432 1141 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 C9orf50Q5SZB4 431 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 LCE4AQ5TA78 99 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 CCDC30Q5VVM6 783 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 ZKSCAN2Q63HK3 967 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 ATF7IPQ6VMQ6 1270 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 ARMC10Q8N2F6 343 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 TMEM130Q8N3G9 435 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-206ENST00000441089 EXOC6Q8TAG9 804 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 XAGE3Q8WTP9 111 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 SCG3Q8WXD2 468 aaKnown RBP5.95□□□□□ -1.46
PTPN4-206ENST00000441089 TTC9Q92623 222 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 TEPSINQ96N21 525 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 WRNIP1Q96S55 665 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 CDC5LQ99459 802 aaKnown RBP5.95□□□□□ -1.46
PTPN4-206ENST00000441089 ZNF576Q9H609 170 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 PHAXQ9H814 394 aaKnown RBP5.95□□□□□ -1.46
PTPN4-206ENST00000441089 CXXC1Q9P0U4 656 aaPredicted RBP5.95□□□□□ -1.46
PTPN4-206ENST00000441089 CHPF2Q9P2E5 772 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 FASNP49327 2511 aaKnown RBP5.95□□□□□ -1.46
PTPN4-206ENST00000441089 KIF16BQ96L93 1317 aa5.95□□□□□ -1.46
PTPN4-206ENST00000441089 RLFQ13129 1914 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 PRR33A8MZF0 331 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 J3QW42 95 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 WISP1O95388 367 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 IGLV1-40P01703 118 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 NEFLP07196 543 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 IGFBP4P22692 258 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 IDH3AP50213 366 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 SETDB1Q15047 1291 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 DCAF15Q66K64 600 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 TMEM57Q8N5G2 664 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 ARHGAP45Q92619 1136 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 ZKSCAN4Q969J2 545 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-206ENST00000441089 RNPC3Q96LT9 517 aaKnown RBP5.94□□□□□ -1.46
PTPN4-206ENST00000441089 NECAB3Q96P71 396 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-206ENST00000441089 ISCA1Q9BUE6 129 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 ZNF70Q9UC06 446 aaPredicted RBP5.94□□□□□ -1.46
PTPN4-206ENST00000441089 GVINP1Q7Z2Y8 2422 aa5.94□□□□□ -1.46
PTPN4-206ENST00000441089 ZNF292O60281 2723 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-206ENST00000441089 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-206ENST00000441089 F6X3S4 739 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 F8W031 263 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-206ENST00000441089 CXCL11O14625 94 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 TM4SF5O14894 197 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 PDE8AO60658 829 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 CYP2C8P10632 490 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 ADAMTSL4Q6UY14 1074 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 FASTKD5Q7L8L6 764 aaKnown RBP5.93□□□□□ -1.46
PTPN4-206ENST00000441089 CERS5Q8N5B7 392 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 PLBD2Q8NHP8 589 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 SMCR8Q8TEV9 937 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-206ENST00000441089 STK31Q9BXU1 1019 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 API5Q9BZZ5 524 aaKnown RBP5.93□□□□□ -1.46
PTPN4-206ENST00000441089 TMEM39BQ9GZU3 492 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 ANKRD2Q9GZV1 360 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 MRPL18Q9H0U6 180 aaKnown RBP5.93□□□□□ -1.46
PTPN4-206ENST00000441089 BSDC1Q9NW68 430 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-206ENST00000441089 DBF4Q9UBU7 674 aaPredicted RBP5.93□□□□□ -1.46
PTPN4-206ENST00000441089 SERPINA10Q9UK55 444 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 MINPP1Q9UNW1 487 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 RAXQ9Y2V3 346 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 SLC45A1Q9Y2W3 748 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 PCDHAC2Q9Y5I4 1007 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 NCOR2Q9Y618 2525 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 PTPRCP08575 1304 aa5.93□□□□□ -1.46
PTPN4-206ENST00000441089 FAM208BQ5VWN6 2430 aa5.92□□□□□ -1.46
PTPN4-206ENST00000441089 PRR19A6NJB7 356 aa5.92□□□□□ -1.46
PTPN4-206ENST00000441089 TCP10L2B9ZVM9 353 aa5.92□□□□□ -1.46
PTPN4-206ENST00000441089 IPO8O15397 1037 aaKnown RBP5.92□□□□□ -1.46
PTPN4-206ENST00000441089 RARAP10276 462 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms