RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 MAPKAPK2P49137 400 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 RASGRF1Q13972 1273 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 MTERF2Q49AM1 385 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 TCERG1LQ5VWI1 586 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 LDHDQ86WU2 507 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 SIAH1Q8IUQ4 282 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 LZTR1Q8N653 840 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 RNPC3Q96LT9 517 aaKnown RBP5.24□□□□□ -1.57
VPS41-207ENST00000439468 RXFP1Q9HBX9 757 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 BTG4Q9NY30 223 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 GULP1Q9UBP9 304 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 CADPSQ9ULU8 1353 aa5.24□□□□□ -1.57
VPS41-207ENST00000439468 KDM2BQ8NHM5 1336 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 SRGAP3O43295 1099 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 NPHS1O60500 1241 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 BUB1BO60566 1050 aaPredicted RBP5.23□□□□□ -1.57
VPS41-207ENST00000439468 PLS3P13797 630 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 PFKLP17858 780 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 IFRD2Q12894 506 aaPredicted RBP5.23□□□□□ -1.57
VPS41-207ENST00000439468 CBX2Q14781 532 aaPredicted RBP5.23□□□□□ -1.57
VPS41-207ENST00000439468 SLC10A6Q3KNW5 377 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 GTF2IRD2BQ6EKJ0 949 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 CNKSR3Q6P9H4 555 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 GTF2IRD2Q86UP8 949 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 TMEM151BQ8IW70 566 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 TRIM59Q8IWR1 403 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 PANK1Q8TE04 598 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 BTN2A2Q8WVV5 523 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 GPRC5CQ9NQ84 441 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 HCFC2Q9Y5Z7 792 aa5.23□□□□□ -1.57
VPS41-207ENST00000439468 FUCA1P04066 466 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 THBDP07204 575 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 SNRPB2P08579 225 aaKnown RBP5.22□□□□□ -1.57
VPS41-207ENST00000439468 BMP7P18075 431 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 ECI1P42126 302 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 KCNJ6P48051 423 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 AFF3P51826 1226 aaKnown RBP5.22□□□□□ -1.57
VPS41-207ENST00000439468 PRR5P85299 388 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 ZNF662Q6ZS27 426 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 EEPD1Q7L9B9 569 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 ZNF513Q8N8E2 541 aaPredicted RBP5.22□□□□□ -1.57
VPS41-207ENST00000439468 SH3TC2Q8TF17 1288 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 ALG3Q92685 438 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 NUDT5Q9UKK9 219 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 FAN1Q9Y2M0 1017 aa5.22□□□□□ -1.57
VPS41-207ENST00000439468 ESYT3A0FGR9 886 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 TBX1O43435 398 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 FAM153BP0C7A2 387 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 LIMS1P48059 325 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 SSRP1Q08945 709 aaKnown RBP5.21□□□□□ -1.58
VPS41-207ENST00000439468 SQSTM1Q13501 440 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 TARBP2Q15633 366 aaKnown RBP5.21□□□□□ -1.58
VPS41-207ENST00000439468 VMACQ2NL98 169 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 FOXB2Q5VYV0 432 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 SDE2Q6IQ49 451 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 LRP10Q7Z4F1 713 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 AMIGO3Q86WK7 504 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 ZNF227Q86WZ6 799 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 IGDCC3Q8IVU1 814 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 NLGN2Q8NFZ4 835 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 PWWP2AQ96N64 755 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 NKX2-4Q9H2Z4 354 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 ZCCHC4Q9H5U6 513 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 BCAS3Q9H6U6 928 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 MARCH2Q9P0N8 246 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 TMA7Q9Y2S6 64 aaKnown RBP5.21□□□□□ -1.58
VPS41-207ENST00000439468 PCDHA5Q9Y5H7 936 aa5.21□□□□□ -1.58
VPS41-207ENST00000439468 A0A1W2PQU0 124 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 C7orf72A4D263 438 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 AGRPO00253 132 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 IRS4O14654 1257 aaPredicted RBP5.2□□□□□ -1.58
VPS41-207ENST00000439468 ITGAVP06756 1048 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 INHBBP09529 407 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 GLI4P10075 376 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 GRIA2P42262 883 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 YOD1Q5VVQ6 348 aaPredicted RBP5.2□□□□□ -1.58
VPS41-207ENST00000439468 TMEFF1Q8IYR6 380 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 ST13P5Q8NFI4 369 aaPredicted RBP5.2□□□□□ -1.58
VPS41-207ENST00000439468 COPS5Q92905 334 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 PEX11GQ96HA9 241 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 MRGPRX3Q96LB0 322 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 CYP26B1Q9NR63 512 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 FBLN5Q9UBX5 448 aa5.2□□□□□ -1.58
VPS41-207ENST00000439468 MEFVO15553 781 aaPredicted RBP5.19□□□□□ -1.58
VPS41-207ENST00000439468 MYO1BO43795 1136 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 ADCY3O60266 1144 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 NTRK1P04629 796 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 MBLAC2Q68D91 279 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 WWC2Q6AWC2 1192 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 FAM129CQ86XR2 697 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 TEX2Q8IWB9 1127 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 NETO2Q8NC67 525 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 MMP19Q99542 508 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 SPATA9Q9BWV2 254 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 FANCLQ9NW38 375 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.19□□□□□ -1.58
VPS41-207ENST00000439468 PLA2G2DQ9UNK4 145 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 PTCH2Q9Y6C5 1203 aa5.19□□□□□ -1.58
VPS41-207ENST00000439468 PPP1R11O60927 126 aaPredicted RBP5.18□□□□□ -1.58
VPS41-207ENST00000439468 NCAM1P13591 858 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms