RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 KCNJ12Q14500 433 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 TBC1D10BQ4KMP7 808 aaPredicted RBP9.54□□□□□ -0.88
HPS4-206ENST00000439453 TCP11X2Q5H9J9 407 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 RRAGBQ5VZM2 374 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 DLK2Q6UY11 383 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 OR8K1Q8NGG5 319 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 SYMPKQ92797 1274 aaKnown RBP9.54□□□□□ -0.88
HPS4-206ENST00000439453 ZNF512BQ96KM6 892 aaPredicted RBP9.54□□□□□ -0.88
HPS4-206ENST00000439453 SH3GL2Q99962 352 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 GNL3LQ9NVN8 582 aaKnown RBP9.54□□□□□ -0.88
HPS4-206ENST00000439453 ZNF185O15231 689 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 CCDC172P0C7W6 258 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 C2orf54Q08AI8 447 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 CAVIN4Q5BKX8 364 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 TTC19Q6DKK2 380 aaPredicted RBP9.54□□□□□ -0.88
HPS4-206ENST00000439453 SND1Q7KZF4 910 aaKnown RBP eCLIP9.54□□□□□ -0.88
HPS4-206ENST00000439453 KIAA0825Q8IV33 1275 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 PRPF38AQ8NAV1 312 aaKnown RBP9.54□□□□□ -0.88
HPS4-206ENST00000439453 MTMR14Q8NCE2 650 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 EHBP1Q8NDI1 1231 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 RWDD2AQ9UIY3 292 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 CAPN7Q9Y6W3 813 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 TTC26A0AVF1 554 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 TRIM75PA6NK02 468 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 USP17L8P0C7I0 530 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 NBPF9Q3BBW0 867 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 CCDC70Q6NSX1 233 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 KIAA1328Q86T90 577 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 AMOTL1Q8IY63 956 aa9.54□□□□□ -0.88
HPS4-206ENST00000439453 OPA1O60313 960 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 DEXIO95424 95 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 RTN1Q16799 776 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 MFSD14BQ5SR56 506 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 IQCEQ6IPM2 695 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 CHADLQ6NUI6 762 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 CCDC82Q8N4S0 544 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 STAMQ92783 540 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 ZSWIM5Q9P217 1185 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 WNT10BO00744 389 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 KRT86O43790 486 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 PRDX5P30044 214 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 KRT83P78385 493 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 SETQ01105 290 aaPredicted RBP9.53□□□□□ -0.88
HPS4-206ENST00000439453 FSTL1Q12841 308 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 PAK1Q13153 545 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 TSR1Q2NL82 804 aaKnown RBP9.53□□□□□ -0.88
HPS4-206ENST00000439453 ZNF662Q6ZS27 426 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 B4GALNT4Q76KP1 1039 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 PNMA8AQ86V59 439 aaPredicted RBP9.53□□□□□ -0.88
HPS4-206ENST00000439453 RRP36Q96EU6 259 aaKnown RBP9.53□□□□□ -0.88
HPS4-206ENST00000439453 DNAJC7Q99615 494 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 HINFPQ9BQA5 517 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 LUC7L2Q9Y383 392 aaKnown RBP9.53□□□□□ -0.88
HPS4-206ENST00000439453 FAM205CA6NFA0 338 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 G3V3G9 751 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 SKOR1P84550 965 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 DCAF8Q5TAQ9 597 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 MAP1SQ66K74 1059 aaPredicted RBP9.53□□□□□ -0.88
HPS4-206ENST00000439453 CMTR1Q8N1G2 835 aaKnown RBP9.53□□□□□ -0.88
HPS4-206ENST00000439453 NELFBQ8WX92 580 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 AIDAQ96BJ3 306 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 CABS1Q96KC9 395 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 BLZF1Q9H2G9 400 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 DONSONQ9NYP3 566 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 CEP83Q9Y592 693 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 ATXN2Q99700 1313 aaKnown RBP9.53□□□□□ -0.88
HPS4-206ENST00000439453 NAV1Q8NEY1 1877 aa9.53□□□□□ -0.88
HPS4-206ENST00000439453 NID2Q14112 1375 aa9.52□□□□□ -0.88
HPS4-206ENST00000439453 FNTAP49354 379 aa9.52□□□□□ -0.88
HPS4-206ENST00000439453 EAPPQ56P03 285 aaPredicted RBP9.52□□□□□ -0.88
HPS4-206ENST00000439453 WDR59Q6PJI9 974 aa9.52□□□□□ -0.88
HPS4-206ENST00000439453 CRACR2BQ8N4Y2 399 aaPredicted RBP9.52□□□□□ -0.88
HPS4-206ENST00000439453 SMC1BQ8NDV3 1235 aa9.52□□□□□ -0.88
HPS4-206ENST00000439453 ANO9A1A5B4 782 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 NDUFAB1O14561 156 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 KIAA0754O94854 1291 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 MMGT1Q8N4V1 131 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 JADE2Q9NQC1 790 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 MYH1P12882 1939 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 PHIPQ8WWQ0 1821 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 ATAD5Q96QE3 1844 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 A6NNZ2 444 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 H0YHG0 523 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 MYO1FO00160 1098 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 EPB41P11171 864 aaKnown RBP9.52□□□□□ -0.89
HPS4-206ENST00000439453 IDEP14735 1019 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 CTDSPL2Q05D32 466 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 TUBB8Q3ZCM7 444 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 OTUD6BQ8N6M0 293 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 MB21D1Q8N884 522 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 FERMT2Q96AC1 680 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 ARL8AQ96BM9 186 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 LACRTQ9GZZ8 138 aa9.52□□□□□ -0.89
HPS4-206ENST00000439453 RCCD1A6NED2 376 aa9.51□□□□□ -0.89
HPS4-206ENST00000439453 TRAF5O00463 557 aa9.51□□□□□ -0.89
HPS4-206ENST00000439453 FSBPO95073 299 aa9.51□□□□□ -0.89
HPS4-206ENST00000439453 TTMPQ5BVD1 217 aa9.51□□□□□ -0.89
HPS4-206ENST00000439453 RPAINQ86UA6 219 aa9.51□□□□□ -0.89
HPS4-206ENST00000439453 ZC3H15Q8WU90 426 aaKnown RBP9.51□□□□□ -0.89
HPS4-206ENST00000439453 A1CFQ9NQ94 594 aaKnown RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms