RNA–Protein interactions for RNA: ENST00000439176.5

ERCC8-203, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 5

Gene ERCC8, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-203ENST00000439176 MFSD6Q6ZSS7 791 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 TMEM199Q8N511 208 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 FAM133AQ8N9E0 248 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 LENG1Q96BZ8 264 aaPredicted RBP8□□□□□ -1.13
ERCC8-203ENST00000439176 CHMP4CQ96CF2 233 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 AGBL1Q96MI9 1066 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 TTC14Q96N46 770 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 CRBNQ96SW2 442 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 PRKD2Q9BZL6 878 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 UPF3AQ9H1J1 476 aaKnown RBP8□□□□□ -1.13
ERCC8-203ENST00000439176 MTIF3Q9H2K0 278 aaKnown RBP8□□□□□ -1.13
ERCC8-203ENST00000439176 A1CFQ9NQ94 594 aaKnown RBP8□□□□□ -1.13
ERCC8-203ENST00000439176 IL17RBQ9NRM6 502 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 PRR12Q9ULL5 1215 aa8□□□□□ -1.13
ERCC8-203ENST00000439176 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8□□□□□ -1.13
ERCC8-203ENST00000439176 LOC102724159A0A0B4J2E5 919 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.99□□□□□ -1.13
ERCC8-203ENST00000439176 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.99□□□□□ -1.13
ERCC8-203ENST00000439176 ARVCFO00192 962 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 NMT2O60551 498 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 FGAP02671 866 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 FGRP09769 529 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 CNTN2Q02246 1040 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 PWP2Q15269 919 aaKnown RBP7.99□□□□□ -1.13
ERCC8-203ENST00000439176 FSCN1Q16658 493 aaKnown RBP7.99□□□□□ -1.13
ERCC8-203ENST00000439176 BRDTQ58F21 947 aaPredicted RBP7.99□□□□□ -1.13
ERCC8-203ENST00000439176 CCDC178Q5BJE1 867 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 SWT1Q5T5J6 900 aaKnown RBP7.99□□□□□ -1.13
ERCC8-203ENST00000439176 CCSAPQ6IQ19 270 aaPredicted RBP7.99□□□□□ -1.13
ERCC8-203ENST00000439176 MFSD5Q6N075 450 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 NSMFQ6X4W1 530 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 TLK2Q86UE8 772 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 RILPL2Q969X0 211 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 SEMA6BQ9H3T3 888 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 VTA1Q9NP79 307 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 TCP11L1Q9NUJ3 509 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 CYP39A1Q9NYL5 469 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 Q9Y3F1 56 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 ZNF536O15090 1300 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 SALL3Q9BXA9 1300 aa7.99□□□□□ -1.13
ERCC8-203ENST00000439176 PTPDC1A2A3K4 754 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 MYADML2A6NDP7 307 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 HIP1O00291 1037 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 ZNF213O14771 459 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 DYNC1LI2O43237 492 aaPredicted RBP7.98□□□□□ -1.13
ERCC8-203ENST00000439176 HSPD1P10809 573 aaKnown RBP7.98□□□□□ -1.13
ERCC8-203ENST00000439176 ITGB8P26012 769 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 NOVP48745 357 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 CDK7P50613 346 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 NKX3-2P78367 333 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 AKNAD1Q5T1N1 836 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 VPS53Q5VIR6 699 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 SYDE2Q5VT97 1194 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 PSRC1Q6PGN9 363 aaPredicted RBP7.98□□□□□ -1.13
ERCC8-203ENST00000439176 BTNL9Q6UXG8 535 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 KIAA1211Q6ZU35 1233 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 IQCA1Q86XH1 822 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 PHF6Q8IWS0 365 aaKnown RBP eCLIP7.98□□□□□ -1.13
ERCC8-203ENST00000439176 ESR2Q92731 530 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 FAM227BQ96M60 508 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 FGD4Q96M96 766 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 GUCD1Q96NT3 240 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 CDX2Q99626 313 aaPredicted RBP7.98□□□□□ -1.13
ERCC8-203ENST00000439176 TMEM47Q9BQJ4 181 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 LNPKQ9C0E8 428 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 RANBP17Q9H2T7 1088 aaKnown RBP7.98□□□□□ -1.13
ERCC8-203ENST00000439176 INCENPQ9NQS7 918 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 TBX21Q9UL17 535 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 ZMYM6O95789 1325 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 CCDC171Q6TFL3 1326 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 RAD50Q92878 1312 aa7.98□□□□□ -1.13
ERCC8-203ENST00000439176 LTBP2Q14767 1821 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 COL6A3P12111 3177 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 A0A0D9SFI3 127 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 FOXP2O15409 715 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 FOSL2P15408 326 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 SLC16A2P36021 539 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 CPT1AP50416 773 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 SNAP25P60880 206 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 HAND2P61296 217 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 BEX3Q00994 111 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 PDE4DQ08499 809 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 NMIQ13287 307 aaPredicted RBP7.97□□□□□ -1.13
ERCC8-203ENST00000439176 ITGA7Q13683 1181 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 BAATQ14032 418 aaPredicted RBP7.97□□□□□ -1.13
ERCC8-203ENST00000439176 MUM1L1Q5H9M0 696 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 GPATCH4Q5T3I0 446 aaKnown RBP7.97□□□□□ -1.13
ERCC8-203ENST00000439176 B4GALNT3Q6L9W6 998 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 CXCL17Q6UXB2 119 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 RNF207Q6ZRF8 634 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 EEPD1Q7L9B9 569 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 FAM126BQ8IXS8 530 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 KATNBL1Q9H079 304 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 GPCPD1Q9NPB8 672 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 DIAPH3Q9NSV4 1193 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 POLR3EQ9NVU0 708 aa7.97□□□□□ -1.13
ERCC8-203ENST00000439176 GNEQ9Y223 722 aaKnown RBP7.97□□□□□ -1.13
ERCC8-203ENST00000439176 C11orf97A0A1B0GVM6 126 aaPredicted RBP7.96□□□□□ -1.14
ERCC8-203ENST00000439176 NKRFO15226 690 aaKnown RBP eCLIP7.96□□□□□ -1.14
ERCC8-203ENST00000439176 ADCY6O43306 1168 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms