RNA–Protein interactions for RNA: ENST00000438223.5

SMTN-210, Transcript of smoothelin, humanhuman

TSL 4

Gene SMTN, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMTN-210ENST00000438223 RTN1Q16799 776 aa18.36■□□□□ 0.53
SMTN-210ENST00000438223 IQSEC1Q6DN90 963 aa18.36■□□□□ 0.53
SMTN-210ENST00000438223 CHRDL2Q6WN34 429 aa18.36■□□□□ 0.53
SMTN-210ENST00000438223 CNTNAP5Q8WYK1 1306 aa18.36■□□□□ 0.53
SMTN-210ENST00000438223 GPKOWQ92917 476 aaPredicted RBP eCLIP18.36■□□□□ 0.53
SMTN-210ENST00000438223 WDR11Q9BZH6 1224 aa18.36■□□□□ 0.53
SMTN-210ENST00000438223 UPF3BQ9BZI7 483 aaKnown RBP18.36■□□□□ 0.53
SMTN-210ENST00000438223 PXMP2Q9NR77 195 aa18.36■□□□□ 0.53
SMTN-210ENST00000438223 NR2E3Q9Y5X4 410 aa18.36■□□□□ 0.53
SMTN-210ENST00000438223 RBM47A0AV96 593 aaKnown RBP18.35■□□□□ 0.53
SMTN-210ENST00000438223 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
SMTN-210ENST00000438223 ASGR1P07306 291 aa18.35■□□□□ 0.53
SMTN-210ENST00000438223 HMGB1P09429 215 aaKnown RBP18.35■□□□□ 0.53
SMTN-210ENST00000438223 ADD1P35611 737 aaKnown RBP18.35■□□□□ 0.53
SMTN-210ENST00000438223 FGD1P98174 961 aa18.35■□□□□ 0.53
SMTN-210ENST00000438223 GHRHRQ02643 423 aa18.35■□□□□ 0.53
SMTN-210ENST00000438223 GNASQ5JWF2 1037 aa18.35■□□□□ 0.53
SMTN-210ENST00000438223 ARHGEF16Q5VV41 709 aa18.35■□□□□ 0.53
SMTN-210ENST00000438223 SYNE3Q6ZMZ3 975 aa18.35■□□□□ 0.53
SMTN-210ENST00000438223 NSUN6Q8TEA1 469 aaKnown RBP18.35■□□□□ 0.53
SMTN-210ENST00000438223 LZTS2Q9BRK4 669 aa18.35■□□□□ 0.53
SMTN-210ENST00000438223 CEP290O15078 2479 aa18.35■□□□□ 0.53
SMTN-210ENST00000438223 GCOM1H8Y6P7 765 aaPredicted RBP18.34■□□□□ 0.53
SMTN-210ENST00000438223 POLR2MP0CAP2 368 aa18.34■□□□□ 0.53
SMTN-210ENST00000438223 MYCLP12524 364 aaPredicted RBP18.34■□□□□ 0.53
SMTN-210ENST00000438223 CST5P28325 142 aaPredicted RBP18.34■□□□□ 0.53
SMTN-210ENST00000438223 SMARCA1P28370 1054 aa18.34■□□□□ 0.53
SMTN-210ENST00000438223 TOB2Q14106 344 aaPredicted RBP18.34■□□□□ 0.53
SMTN-210ENST00000438223 TYW1BQ6NUM6 668 aa18.34■□□□□ 0.53
SMTN-210ENST00000438223 USP17L6PQ6QN14 398 aa18.34■□□□□ 0.53
SMTN-210ENST00000438223 SEPT14Q6ZU15 432 aa18.34■□□□□ 0.53
SMTN-210ENST00000438223 SH3RF1Q7Z6J0 888 aa18.34■□□□□ 0.53
SMTN-210ENST00000438223 PPP1R13LQ8WUF5 828 aa18.34■□□□□ 0.53
SMTN-210ENST00000438223 PDCD2LQ9BRP1 358 aa18.34■□□□□ 0.53
SMTN-210ENST00000438223 ZSWIM6Q9HCJ5 1215 aa18.34■□□□□ 0.53
SMTN-210ENST00000438223 NR3C2P08235 984 aa18.33■□□□□ 0.52
SMTN-210ENST00000438223 SNX17Q15036 470 aa18.33■□□□□ 0.52
SMTN-210ENST00000438223 UBE2SQ16763 222 aa18.33■□□□□ 0.52
SMTN-210ENST00000438223 LY6KQ17RY6 165 aa18.33■□□□□ 0.52
SMTN-210ENST00000438223 DUSP28Q4G0W2 176 aa18.33■□□□□ 0.52
SMTN-210ENST00000438223 CXCL17Q6UXB2 119 aa18.33■□□□□ 0.52
SMTN-210ENST00000438223 RUFY3Q7L099 469 aa18.33■□□□□ 0.52
SMTN-210ENST00000438223 TSEN34Q9BSV6 310 aaKnown RBP18.33■□□□□ 0.52
SMTN-210ENST00000438223 AP5M1Q9H0R1 490 aa18.33■□□□□ 0.52
SMTN-210ENST00000438223 SEC63Q9UGP8 760 aaKnown RBP18.33■□□□□ 0.52
SMTN-210ENST00000438223 V9GY48 417 aaPredicted RBP18.33■□□□□ 0.52
SMTN-210ENST00000438223 LOC102724159A0A0B4J2E5 919 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 SORBS3O60504 671 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 DTNBO60941 627 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 RGS20O76081 388 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 NKX3-2P78367 333 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 TLE2Q04725 743 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 PGM5Q15124 567 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 PWP2Q15269 919 aaKnown RBP18.32■□□□□ 0.52
SMTN-210ENST00000438223 FSCN1Q16658 493 aaKnown RBP18.32■□□□□ 0.52
SMTN-210ENST00000438223 WWC2Q6AWC2 1192 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 HEATR3Q7Z4Q2 680 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 OR6J1Q8NGC5 347 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 AGXT2Q9BYV1 514 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 NCOA5Q9HCD5 579 aaKnown RBP18.32■□□□□ 0.52
SMTN-210ENST00000438223 STARD7Q9NQZ5 370 aa18.32■□□□□ 0.52
SMTN-210ENST00000438223 RBM27Q9P2N5 1060 aaKnown RBP18.32■□□□□ 0.52
SMTN-210ENST00000438223 DNAH12Q6ZR08 3092 aa18.31■□□□□ 0.52
SMTN-210ENST00000438223 MEIS2O14770 477 aa18.31■□□□□ 0.52
SMTN-210ENST00000438223 ADAMTS3O15072 1205 aa18.31■□□□□ 0.52
SMTN-210ENST00000438223 PQBP1O60828 265 aaKnown RBP18.31■□□□□ 0.52
SMTN-210ENST00000438223 TXNP10599 105 aaKnown RBP18.31■□□□□ 0.52
SMTN-210ENST00000438223 PSMA5P28066 241 aa18.31■□□□□ 0.52
SMTN-210ENST00000438223 METAP2P50579 478 aaKnown RBP eCLIP18.31■□□□□ 0.52
SMTN-210ENST00000438223 PSMC6P62333 389 aa18.31■□□□□ 0.52
SMTN-210ENST00000438223 CCT2P78371 535 aaKnown RBP18.31■□□□□ 0.52
SMTN-210ENST00000438223 STXBP2Q15833 593 aa18.31■□□□□ 0.52
SMTN-210ENST00000438223 CCDC62Q6P9F0 684 aa18.31■□□□□ 0.52
SMTN-210ENST00000438223 PRO3102Q9H379 93 aa18.31■□□□□ 0.52
SMTN-210ENST00000438223 SPC25Q9HBM1 224 aa18.31■□□□□ 0.52
SMTN-210ENST00000438223 RBM28Q9NW13 759 aaKnown RBP18.31■□□□□ 0.52
SMTN-210ENST00000438223 GRIN2DO15399 1336 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 TRIM43BA6NCK2 446 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 MOXD2PA6NHM9 499 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 EPB41L2O43491 1005 aaKnown RBP18.3■□□□□ 0.52
SMTN-210ENST00000438223 PDIA3P30101 505 aaKnown RBP18.3■□□□□ 0.52
SMTN-210ENST00000438223 MAGEA10P43363 369 aaPredicted RBP18.3■□□□□ 0.52
SMTN-210ENST00000438223 MDM2Q00987 491 aaPredicted RBP18.3■□□□□ 0.52
SMTN-210ENST00000438223 PPP2R5BQ15173 497 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 SCFD2Q8WU76 684 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 VTI1AQ96AJ9 217 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 TRIM43Q96BQ3 446 aaPredicted RBP18.3■□□□□ 0.52
SMTN-210ENST00000438223 IWS1Q96ST2 819 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 MAF1Q9H063 256 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 BCAS3Q9H6U6 928 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 PRDM5Q9NQX1 630 aaPredicted RBP18.3■□□□□ 0.52
SMTN-210ENST00000438223 CYP46A1Q9Y6A2 500 aa18.3■□□□□ 0.52
SMTN-210ENST00000438223 RBAK-RBAKDNI3L0D1 243 aa18.29■□□□□ 0.52
SMTN-210ENST00000438223 ITGB8P26012 769 aa18.29■□□□□ 0.52
SMTN-210ENST00000438223 MRPS9P82933 396 aaKnown RBP18.29■□□□□ 0.52
SMTN-210ENST00000438223 HABP4Q5JVS0 413 aaKnown RBP18.29■□□□□ 0.52
SMTN-210ENST00000438223 VSIG10LQ86VR7 867 aa18.29■□□□□ 0.52
SMTN-210ENST00000438223 FBXL16Q8N461 479 aa18.29■□□□□ 0.52
SMTN-210ENST00000438223 PCSK9Q8NBP7 692 aaKnown RBP18.29■□□□□ 0.52
SMTN-210ENST00000438223 SMARCC2Q8TAQ2 1214 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms