RNA–Protein interactions for RNA: ENST00000437242.1

HMGB1P31-201, Transcript of high mobility group box 1 pseudogene 31, humanhuman

BASIC

Gene HMGB1P31, Length 427 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P31-201ENST00000437242 RACK1P63244 317 aaKnown RBP5.69□□□□□ -1.5
HMGB1P31-201ENST00000437242 ADAM17P78536 824 aa5.69□□□□□ -1.5
HMGB1P31-201ENST00000437242 DCP2Q8IU60 420 aaKnown RBP5.69□□□□□ -1.5
HMGB1P31-201ENST00000437242 SPATA32Q96LK8 384 aa5.69□□□□□ -1.5
HMGB1P31-201ENST00000437242 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.69□□□□□ -1.5
HMGB1P31-201ENST00000437242 DDX41Q9UJV9 622 aaKnown RBP5.69□□□□□ -1.5
HMGB1P31-201ENST00000437242 EFR3BQ9Y2G0 817 aa5.69□□□□□ -1.5
HMGB1P31-201ENST00000437242 A0A1W2PQH9 124 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 C7orf72A4D263 438 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 PPP1R11O60927 126 aaPredicted RBP5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 FUCA1P04066 466 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 NTRK1P04629 796 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 C8BP07358 591 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 PAK2Q13177 524 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 ARHGEF39Q8N4T4 335 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 OR6P1Q8NGX9 317 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 ADAMTS17Q8TE56 1095 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 RCC1LQ96I51 464 aaKnown RBP5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 PCDH18Q9HCL0 1135 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 SIT1Q9Y3P8 196 aa5.68□□□□□ -1.5
HMGB1P31-201ENST00000437242 SOX9P48436 509 aa5.67□□□□□ -1.5
HMGB1P31-201ENST00000437242 GIPRP48546 466 aa5.67□□□□□ -1.5
HMGB1P31-201ENST00000437242 ETV3LQ6ZN32 361 aa5.67□□□□□ -1.5
HMGB1P31-201ENST00000437242 ZNF654Q8IZM8 581 aa5.67□□□□□ -1.5
HMGB1P31-201ENST00000437242 LINC00482Q8N8I6 264 aa5.67□□□□□ -1.5
HMGB1P31-201ENST00000437242 KLHL6Q8WZ60 621 aa5.67□□□□□ -1.5
HMGB1P31-201ENST00000437242 GORASP1Q9BQQ3 440 aa5.67□□□□□ -1.5
HMGB1P31-201ENST00000437242 AP5M1Q9H0R1 490 aa5.67□□□□□ -1.5
HMGB1P31-201ENST00000437242 CLEC1BQ9P126 229 aa5.67□□□□□ -1.5
HMGB1P31-201ENST00000437242 THBS2P35442 1172 aa5.66□□□□□ -1.5
HMGB1P31-201ENST00000437242 PPP2R5EQ16537 467 aa5.66□□□□□ -1.5
HMGB1P31-201ENST00000437242 RGL3Q3MIN7 710 aa5.66□□□□□ -1.5
HMGB1P31-201ENST00000437242 CRACR2BQ8N4Y2 399 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P31-201ENST00000437242 LOXL4Q96JB6 756 aa5.66□□□□□ -1.5
HMGB1P31-201ENST00000437242 MARCH2Q9P0N8 246 aa5.66□□□□□ -1.5
HMGB1P31-201ENST00000437242 AKT3Q9Y243 479 aa5.66□□□□□ -1.5
HMGB1P31-201ENST00000437242 KCNH1O95259 989 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 PLATP00750 562 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 PLS3P13797 630 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 RPL13P26373 211 aaKnown RBP5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 KIAA1211LQ6NV74 962 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 BORAQ6PGQ7 559 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 FAM124AQ86V42 546 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 ZC3H18Q86VM9 953 aaKnown RBP5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 TTC9BQ8N6N2 239 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 KYQ8NBH2 561 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 GPRASP2Q96D09 838 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 RBM15Q96T37 977 aaKnown RBP eCLIP5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 C11orf84Q9BUA3 381 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 BTG4Q9NY30 223 aa5.65□□□□□ -1.5
HMGB1P31-201ENST00000437242 ANKRD34BA5PLL1 514 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 TNFRSF1AP19438 455 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 ZXDAP98168 799 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 KIAA2012Q0VF49 1180 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 SCRN1Q12765 414 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 FAM26FQ5R3K3 315 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 CPZQ66K79 652 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 MBLAC2Q68D91 279 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 POMZP3Q6PJE2 187 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 VHLLQ6RSH7 139 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 CD300LDQ6UXZ3 194 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 LGI4Q8N135 537 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 PLEKHO2Q8TD55 490 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 SEC14L1Q92503 715 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 C8orf49Q96NF6 230 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 SAMD11Q96NU1 681 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 MMP19Q99542 508 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 APEX2Q9UBZ4 518 aa5.64□□□□□ -1.51
HMGB1P31-201ENST00000437242 MROH6A6NGR9 719 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 SCAMP3O14828 347 aaKnown RBP5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 MATN3O15232 486 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 THBDP07204 575 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 NAT2P11245 290 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 ZNF20P17024 532 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 TBC1D10BQ4KMP7 808 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 MIB1Q86YT6 1006 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 TEX2Q8IWB9 1127 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 TTLL6Q8N841 843 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 COPS5Q92905 334 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 GPRC5CQ9NQ84 441 aa5.63□□□□□ -1.51
HMGB1P31-201ENST00000437242 C22orf46C9J442 243 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 NOP56O00567 594 aaKnown RBP5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 MCTP2Q6DN12 878 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 FAM26EQ8N5C1 309 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 CHST13Q8NET6 341 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 RASGRP4Q8TDF6 673 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 CPLX3Q8WVH0 158 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 DPF3Q92784 378 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 PPP1R14AQ96A00 147 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 SYT3Q9BQG1 590 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 YIPF4Q9BSR8 244 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 KRTAP3-1Q9BYR8 98 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 INVSQ9Y283 1065 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 EMC9Q9Y3B6 208 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 ZNF536O15090 1300 aa5.62□□□□□ -1.51
HMGB1P31-201ENST00000437242 C1QTNF3-AMACRE9PGA6 284 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 SGSM2O43147 1006 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 RECKO95980 971 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 SLC6A11P48066 632 aa5.61□□□□□ -1.51
HMGB1P31-201ENST00000437242 NASPP49321 788 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms