RNA–Protein interactions for RNA: ENST00000435050.1

CLDN4-203, Transcript of claudin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN4, Length 4,163 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-203ENST00000435050 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.56□□□□□ -0.24
CLDN4-203ENST00000435050 PDCL3Q9H2J4 239 aa13.56□□□□□ -0.24
CLDN4-203ENST00000435050 PANK4Q9NVE7 773 aa13.56□□□□□ -0.24
CLDN4-203ENST00000435050 ARGLU1Q9NWB6 273 aaPredicted RBP13.56□□□□□ -0.24
CLDN4-203ENST00000435050 TBC1D10BQ4KMP7 808 aaPredicted RBP13.56□□□□□ -0.24
CLDN4-203ENST00000435050 PDXDC2PQ6P474 469 aa13.56□□□□□ -0.24
CLDN4-203ENST00000435050 ACRBPQ8NEB7 543 aa13.56□□□□□ -0.24
CLDN4-203ENST00000435050 DDX12PQ92771 950 aa13.56□□□□□ -0.24
CLDN4-203ENST00000435050 FAM237AA0A1B0GTK4 181 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 GOLGA6L9A6NEM1 432 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 MYCLP12524 364 aaPredicted RBP13.55□□□□□ -0.24
CLDN4-203ENST00000435050 SARSP49591 514 aaKnown RBP13.55□□□□□ -0.24
CLDN4-203ENST00000435050 TRIM9Q9C026 710 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 RIOX1Q9H6W3 641 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 NLRC4Q9NPP4 1024 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 DNM3Q9UQ16 869 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 SORBS3O60504 671 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 ARHGAP4P98171 946 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 DCAF17Q5H9S7 520 aaPredicted RBP13.55□□□□□ -0.24
CLDN4-203ENST00000435050 HAUS3Q68CZ6 603 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 CCSER1Q9C0I3 900 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 RIC8AQ9NPQ8 531 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 ERCC6LQ2NKX8 1250 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 FAM26FQ5R3K3 315 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 PRAMEF18Q5VWM3 479 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 GLT8D2Q9H1C3 349 aa13.55□□□□□ -0.24
CLDN4-203ENST00000435050 hCG_1984214I3L0E3 225 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 CIAPIN1Q6FI81 312 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 ZNF713Q8N859 430 aaPredicted RBP13.54□□□□□ -0.24
CLDN4-203ENST00000435050 CHURC1Q8WUH1 139 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 ZNF341Q9BYN7 854 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 SERPINA10Q9UK55 444 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.54□□□□□ -0.24
CLDN4-203ENST00000435050 POTEFA5A3E0 1075 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 STX10O60499 249 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 FAM13AO94988 1023 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 POTEIP0CG38 1075 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 POTEGQ6S5H5 508 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 POTEEQ6S8J3 1075 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 DCAF4Q8WV16 495 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 IRX2Q9BZI1 471 aaPredicted RBP13.54□□□□□ -0.24
CLDN4-203ENST00000435050 EHMT1Q9H9B1 1298 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 PIM2Q9P1W9 311 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 ZNF70Q9UC06 446 aaPredicted RBP13.54□□□□□ -0.24
CLDN4-203ENST00000435050 DUOX1Q9NRD9 1551 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 NRAPQ86VF7 1730 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 MACROD2A1Z1Q3 448 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 PSDA5PKW4 1024 aaPredicted RBP13.54□□□□□ -0.24
CLDN4-203ENST00000435050 SFI1A8K8P3 1242 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 IGSF3O75054 1194 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 TNIP1Q15025 636 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 RSBN1LQ6PCB5 846 aaPredicted RBP13.54□□□□□ -0.24
CLDN4-203ENST00000435050 SYCP3Q8IZU3 236 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 CCDC42Q96M95 316 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
CLDN4-203ENST00000435050 FBXO28Q9NVF7 368 aa13.54□□□□□ -0.24
CLDN4-203ENST00000435050 NPHP3-ACAD11A0A0J9YXS1 232 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 GCOM1H8Y6P7 765 aaPredicted RBP13.53□□□□□ -0.24
CLDN4-203ENST00000435050 POLR2MP0CAP2 368 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 WDR78Q5VTH9 848 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 POTEAQ6S8J7 498 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 MYOCDQ8IZQ8 938 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 DAGLBQ8NCG7 672 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 SH2D4AQ9H788 454 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 CCPG1Q9ULG6 757 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 C4BP0C0L5 1744 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 CCNE1P24864 410 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 DALRD3Q5D0E6 543 aaKnown RBP13.53□□□□□ -0.24
CLDN4-203ENST00000435050 NT5C3AQ9H0P0 336 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 NID2Q14112 1375 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 MYMKA6NI61 221 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 GAS7O60861 476 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 FLOT1O75955 427 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 KIF20AO95235 890 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 CYP26C1Q6V0L0 522 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 PAXIP1Q6ZW49 1069 aaPredicted RBP13.53□□□□□ -0.24
CLDN4-203ENST00000435050 MTRQ99707 1265 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 TAOK3Q9H2K8 898 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 CUEDC2Q9H467 287 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 NYAP2Q9P242 653 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 GCNT3O95395 438 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 PLA2G4BP0C869 781 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 PRPHP41219 470 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 FXR1P51114 621 aaKnown RBP eCLIP13.53□□□□□ -0.24
CLDN4-203ENST00000435050 PMS1P54277 932 aaKnown RBP13.53□□□□□ -0.24
CLDN4-203ENST00000435050 GABPAQ06546 454 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 E2F4Q16254 413 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 CCDC122Q5T0U0 273 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 ANKRD40Q6AI12 368 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 PIGOQ8TEQ8 1089 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 CAPZA3Q96KX2 299 aa13.53□□□□□ -0.24
CLDN4-203ENST00000435050 NAP1L4Q99733 375 aaKnown RBP13.53□□□□□ -0.24
CLDN4-203ENST00000435050 ADD3Q9UEY8 706 aaKnown RBP13.53□□□□□ -0.24
CLDN4-203ENST00000435050 DDX60Q8IY21 1712 aaKnown RBP13.53□□□□□ -0.24
CLDN4-203ENST00000435050 IRS2Q9Y4H2 1338 aa13.52□□□□□ -0.24
CLDN4-203ENST00000435050 TTLL12Q14166 644 aaPredicted RBP13.52□□□□□ -0.24
CLDN4-203ENST00000435050 CTTNQ14247 550 aaKnown RBP13.52□□□□□ -0.24
CLDN4-203ENST00000435050 TC2NQ8N9U0 490 aa13.52□□□□□ -0.24
CLDN4-203ENST00000435050 OR8K1Q8NGG5 319 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms