RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 ACAD11Q709F0 780 aa12.5□□□□□ -0.41
LINC01090-202ENST00000434418 TRIM56Q9BRZ2 755 aaKnown RBP12.5□□□□□ -0.41
LINC01090-202ENST00000434418 USP26Q9BXU7 913 aa12.5□□□□□ -0.41
LINC01090-202ENST00000434418 NRSN2Q9GZP1 204 aa12.5□□□□□ -0.41
LINC01090-202ENST00000434418 MRPL18Q9H0U6 180 aaKnown RBP12.5□□□□□ -0.41
LINC01090-202ENST00000434418 GPN3Q9UHW5 284 aaPredicted RBP12.5□□□□□ -0.41
LINC01090-202ENST00000434418 ZNF521Q96K83 1311 aa12.5□□□□□ -0.41
LINC01090-202ENST00000434418 CASP8AP2Q9UKL3 1982 aa12.5□□□□□ -0.41
LINC01090-202ENST00000434418 MYO3BQ8WXR4 1341 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 PITPNM2Q9BZ72 1349 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 IRS2Q9Y4H2 1338 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 WNT10BO00744 389 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 CA12O43570 354 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 PLIN1O60240 522 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 XRCC5P13010 732 aaKnown RBP12.49□□□□□ -0.41
LINC01090-202ENST00000434418 KIF23Q02241 960 aaPredicted RBP12.49□□□□□ -0.41
LINC01090-202ENST00000434418 CCDC57Q2TAC2 916 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 TAF7LQ5H9L4 462 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 RPS26P11Q5JNZ5 115 aaPredicted RBP12.49□□□□□ -0.41
LINC01090-202ENST00000434418 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.49□□□□□ -0.41
LINC01090-202ENST00000434418 FRMD6Q96NE9 622 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 C9orf78Q9NZ63 289 aaPredicted RBP12.49□□□□□ -0.41
LINC01090-202ENST00000434418 JAG2Q9Y219 1238 aa12.49□□□□□ -0.41
LINC01090-202ENST00000434418 F8W735 103 aaPredicted RBP12.48□□□□□ -0.41
LINC01090-202ENST00000434418 ECEL1O95672 775 aa12.48□□□□□ -0.41
LINC01090-202ENST00000434418 ZNF16P17020 682 aaPredicted RBP12.48□□□□□ -0.41
LINC01090-202ENST00000434418 NOS3P29474 1203 aa12.48□□□□□ -0.41
LINC01090-202ENST00000434418 DUOXA2Q1HG44 320 aa12.48□□□□□ -0.41
LINC01090-202ENST00000434418 KIAA1211Q6ZU35 1233 aa12.48□□□□□ -0.41
LINC01090-202ENST00000434418 RASAL3Q86YV0 1011 aa12.48□□□□□ -0.41
LINC01090-202ENST00000434418 SUCLG2Q96I99 432 aa12.48□□□□□ -0.41
LINC01090-202ENST00000434418 CD209Q9NNX6 404 aa12.48□□□□□ -0.41
LINC01090-202ENST00000434418 F8W031 263 aaPredicted RBP12.47□□□□□ -0.41
LINC01090-202ENST00000434418 UBE2Q2LH0YL09 131 aa12.47□□□□□ -0.41
LINC01090-202ENST00000434418 ALDH1L1O75891 902 aa12.47□□□□□ -0.41
LINC01090-202ENST00000434418 CTSBP07858 339 aa12.47□□□□□ -0.41
LINC01090-202ENST00000434418 LDHAL6AQ6ZMR3 332 aa12.47□□□□□ -0.41
LINC01090-202ENST00000434418 CERS5Q8N5B7 392 aa12.47□□□□□ -0.41
LINC01090-202ENST00000434418 RGS22Q8NE09 1264 aa12.47□□□□□ -0.41
LINC01090-202ENST00000434418 CNNM1Q9NRU3 951 aa12.47□□□□□ -0.41
LINC01090-202ENST00000434418 PCDHAC2Q9Y5I4 1007 aa12.47□□□□□ -0.41
LINC01090-202ENST00000434418 LOC100289279A0A1B0GTE1 492 aa12.46□□□□□ -0.41
LINC01090-202ENST00000434418 DLGAP3O95886 979 aa12.46□□□□□ -0.41
LINC01090-202ENST00000434418 PROCP04070 461 aa12.46□□□□□ -0.41
LINC01090-202ENST00000434418 NBPF7P0C2Y1 421 aaPredicted RBP12.46□□□□□ -0.41
LINC01090-202ENST00000434418 IREB2P48200 963 aaKnown RBP12.46□□□□□ -0.41
LINC01090-202ENST00000434418 NRG1Q02297 640 aaPredicted RBP12.46□□□□□ -0.41
LINC01090-202ENST00000434418 PRKG1Q13976 671 aa12.46□□□□□ -0.41
LINC01090-202ENST00000434418 ZNF804AQ7Z570 1209 aa12.46□□□□□ -0.41
LINC01090-202ENST00000434418 WFDC12Q8WWY7 111 aa12.46□□□□□ -0.41
LINC01090-202ENST00000434418 KAZALD1Q96I82 304 aa12.46□□□□□ -0.41
LINC01090-202ENST00000434418 PUS3Q9BZE2 481 aaKnown RBP12.46□□□□□ -0.41
LINC01090-202ENST00000434418 HDAC9Q9UKV0 1011 aa12.46□□□□□ -0.41
LINC01090-202ENST00000434418 AKAP11Q9UKA4 1901 aa12.46□□□□□ -0.42
LINC01090-202ENST00000434418 CCDC85CA6NKD9 419 aa12.45□□□□□ -0.42
LINC01090-202ENST00000434418 CTSHP09668 335 aa12.45□□□□□ -0.42
LINC01090-202ENST00000434418 FKBP1BP68106 108 aa12.45□□□□□ -0.42
LINC01090-202ENST00000434418 MEI1Q5TIA1 1274 aa12.45□□□□□ -0.42
LINC01090-202ENST00000434418 SPOCK3Q9BQ16 436 aa12.45□□□□□ -0.42
LINC01090-202ENST00000434418 MCOLN1Q9GZU1 580 aa12.45□□□□□ -0.42
LINC01090-202ENST00000434418 AKTIPQ9H8T0 292 aa12.45□□□□□ -0.42
LINC01090-202ENST00000434418 RNF186Q9NXI6 227 aa12.45□□□□□ -0.42
LINC01090-202ENST00000434418 FZD1Q9UP38 647 aa12.45□□□□□ -0.42
LINC01090-202ENST00000434418 ECM29Q5VYK3 1845 aa12.44□□□□□ -0.42
LINC01090-202ENST00000434418 IL1R1P14778 569 aa12.44□□□□□ -0.42
LINC01090-202ENST00000434418 MAOBP27338 520 aa12.44□□□□□ -0.42
LINC01090-202ENST00000434418 DLGAP5Q15398 846 aa12.44□□□□□ -0.42
LINC01090-202ENST00000434418 C15orf52Q6ZUT6 534 aaKnown RBP12.44□□□□□ -0.42
LINC01090-202ENST00000434418 APOBEC3FQ8IUX4 373 aaKnown RBP12.44□□□□□ -0.42
LINC01090-202ENST00000434418 SSH1Q8WYL5 1049 aa12.44□□□□□ -0.42
LINC01090-202ENST00000434418 BICC1Q9H694 974 aaKnown RBP12.44□□□□□ -0.42
LINC01090-202ENST00000434418 TTF2Q9UNY4 1162 aaKnown RBP12.44□□□□□ -0.42
LINC01090-202ENST00000434418 AOX1Q06278 1338 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 CLRN2A0PK11 232 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 E9PSI1 815 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 NF2P35240 595 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 GATA4P43694 442 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 GYG1P46976 350 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 STK35Q8TDR2 534 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 ZBED3Q96IU2 234 aaPredicted RBP12.43□□□□□ -0.42
LINC01090-202ENST00000434418 MEGF10Q96KG7 1140 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 TMEM39AQ9NV64 488 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 SAGE1Q9NXZ1 904 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 VTI1BQ9UEU0 232 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 PPM1HQ9ULR3 514 aa12.43□□□□□ -0.42
LINC01090-202ENST00000434418 ARAP2Q8WZ64 1704 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 UTYO14607 1347 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 ENC1O14682 589 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 SORBS3O60504 671 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 PAGE1O75459 146 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 CELA3AP09093 270 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 CFAP100Q494V2 611 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 TMEM130Q8N3G9 435 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 ANKRD44Q8N8A2 993 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 KLHDC4Q8TBB5 520 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 NECAB3Q96P71 396 aaPredicted RBP12.42□□□□□ -0.42
LINC01090-202ENST00000434418 DEFB129Q9H1M3 183 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 ZFYVE1Q9HBF4 777 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 SSC5DA1L4H1 1573 aa12.42□□□□□ -0.42
LINC01090-202ENST00000434418 PTPRCP08575 1304 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms