RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 MKI67P46013 3256 aaKnown RBP20.73■□□□□ 0.91
HMGN1-206ENST00000431390 LAD1O00515 517 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 CFBP00751 764 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 CETPP11597 493 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 MCM7P33993 719 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 PTGDRQ13258 359 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 CRHR2Q13324 411 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 TMEM132BQ14DG7 1078 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 LETM2Q2VYF4 491 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 GPAT2Q6NUI2 795 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 ERO1AQ96HE7 468 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 TEX13BQ9BXU2 312 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 FBXO2Q9UK22 296 aaPredicted RBP20.72■□□□□ 0.91
HMGN1-206ENST00000431390 OSBPP22059 807 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 HSD17B4P51659 736 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 ARL6IP4Q66PJ3 421 aaKnown RBP20.72■□□□□ 0.91
HMGN1-206ENST00000431390 PPP4R3AQ6IN85 833 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 FERMT2Q96AC1 680 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 MS4A4AQ96JQ5 239 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 MAF1Q9H063 256 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 ASCC2Q9H1I8 757 aaPredicted RBP20.72■□□□□ 0.91
HMGN1-206ENST00000431390 PTPN22Q9Y2R2 807 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 SLC45A1Q9Y2W3 748 aa20.72■□□□□ 0.91
HMGN1-206ENST00000431390 KIAA0100Q14667 2235 aaKnown RBP20.71■□□□□ 0.91
HMGN1-206ENST00000431390 CCNT1O60563 726 aaKnown RBP20.71■□□□□ 0.91
HMGN1-206ENST00000431390 GCFC2P16383 781 aaKnown RBP20.71■□□□□ 0.91
HMGN1-206ENST00000431390 CMA1P23946 247 aa20.71■□□□□ 0.91
HMGN1-206ENST00000431390 USP11P51784 963 aa20.71■□□□□ 0.91
HMGN1-206ENST00000431390 SNRNP48Q6IEG0 339 aaKnown RBP20.71■□□□□ 0.91
HMGN1-206ENST00000431390 CCAR1Q8IX12 1150 aaKnown RBP20.71■□□□□ 0.91
HMGN1-206ENST00000431390 C4orf32Q8N8J7 132 aa20.71■□□□□ 0.91
HMGN1-206ENST00000431390 ZNF579Q8NAF0 562 aaKnown RBP20.71■□□□□ 0.91
HMGN1-206ENST00000431390 MRPS27Q92552 414 aaKnown RBP20.71■□□□□ 0.91
HMGN1-206ENST00000431390 SYAP1Q96A49 352 aaPredicted RBP20.71■□□□□ 0.91
HMGN1-206ENST00000431390 TRERF1Q96PN7 1200 aa20.71■□□□□ 0.91
HMGN1-206ENST00000431390 P2RX7Q99572 595 aaKnown RBP20.71■□□□□ 0.91
HMGN1-206ENST00000431390 EHMT1Q9H9B1 1298 aa20.71■□□□□ 0.91
HMGN1-206ENST00000431390 NFIBO00712 420 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 EDIL3O43854 480 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 HOXA13P31271 388 aaPredicted RBP20.7■□□□□ 0.9
HMGN1-206ENST00000431390 SREBF1P36956 1147 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 STAT3P40763 770 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 HERVK_113P62684 666 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 TPRNQ4KMQ1 711 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 MOXD1Q6UVY6 613 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 CRYGNQ8WXF5 182 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 TBC1D5Q92609 795 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 PTPN18Q99952 460 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 PNMA3Q9UL41 463 aa20.7■□□□□ 0.9
HMGN1-206ENST00000431390 PRPHP41219 470 aa20.69■□□□□ 0.9
HMGN1-206ENST00000431390 CAP1Q01518 475 aa20.69■□□□□ 0.9
HMGN1-206ENST00000431390 MUM1L1Q5H9M0 696 aa20.69■□□□□ 0.9
HMGN1-206ENST00000431390 CAVIN1Q6NZI2 390 aaKnown RBP20.69■□□□□ 0.9
HMGN1-206ENST00000431390 FSIP1Q8NA03 581 aa20.69■□□□□ 0.9
HMGN1-206ENST00000431390 RNF146Q9NTX7 359 aa20.69■□□□□ 0.9
HMGN1-206ENST00000431390 NEMFO60524 1076 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 LIG1P18858 919 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 ARHGAP4P98171 946 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 CCDC73Q6ZRK6 1079 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 GTF3C2Q8WUA4 911 aaPredicted RBP20.68■□□□□ 0.9
HMGN1-206ENST00000431390 EFCC1Q9HA90 598 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 HOMER2Q9NSB8 354 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 RIPK3Q9Y572 518 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 CYP3A7-CYP3A51PA0A087WV96 503 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 CCL15-CCL14A0A0B4J2E2 113 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 FAM237AA0A1B0GTK4 181 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 CYP3A4P08684 503 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 CYP3A7P24462 503 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 SP3Q02447 781 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 FAM160A1Q05DH4 1040 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 CCL15Q16663 113 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 RESP18Q5W5W9 173 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 SHC4Q6S5L8 630 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 ANKRD23Q86SG2 305 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 FCHSD1Q86WN1 690 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 CLIC6Q96NY7 704 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 GOLPH3LQ9H4A5 285 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 DDX19AQ9NUU7 478 aaKnown RBP20.68■□□□□ 0.9
HMGN1-206ENST00000431390 TMEM63CQ9P1W3 806 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 RABGAP1Q9Y3P9 1069 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 MRVI1Q9Y6F6 885 aa20.68■□□□□ 0.9
HMGN1-206ENST00000431390 ZSWIM8A7E2V4 1837 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 TESPA1A2RU30 521 aaPredicted RBP20.67■□□□□ 0.9
HMGN1-206ENST00000431390 HABP4Q5JVS0 413 aaKnown RBP20.67■□□□□ 0.9
HMGN1-206ENST00000431390 POTEEQ6S8J3 1075 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 RIOX2Q8IUF8 465 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 CHST13Q8NET6 341 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 BRI3BPQ8WY22 251 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 MBOAT7Q96N66 472 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 TMEM60Q9H2L4 133 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 ACAD9Q9H845 621 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 BTBD7Q9P203 1132 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 BRCA2P51587 3418 aa20.67■□□□□ 0.9
HMGN1-206ENST00000431390 TDP2O95551 362 aa20.66■□□□□ 0.9
HMGN1-206ENST00000431390 OR52Z1P0C646 297 aa20.66■□□□□ 0.9
HMGN1-206ENST00000431390 EN2P19622 333 aaPredicted RBP20.66■□□□□ 0.9
HMGN1-206ENST00000431390 CIITAP33076 1130 aa20.66■□□□□ 0.9
HMGN1-206ENST00000431390 PLS1Q14651 629 aa20.66■□□□□ 0.9
HMGN1-206ENST00000431390 CCDC183Q5T5S1 534 aa20.66■□□□□ 0.9
HMGN1-206ENST00000431390 RNF207Q6ZRF8 634 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms