RNA–Protein interactions for RNA: ENST00000428098.5

DDX39B-208, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-208ENST00000428098 COPS5Q92905 334 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 MKL1Q969V6 931 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 NOD1Q9Y239 953 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 GVINP1Q7Z2Y8 2422 aa14.27□□□□□ -0.13
DDX39B-208ENST00000428098 CACNA1GO43497 2377 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 IGKV6D-41A0A0C4DH26 115 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 PROB1E7EW31 1015 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 H0Y858 1186 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 STXBP3O00186 592 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 ALAS1P13196 640 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 AVPR2P30518 371 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 RARSP54136 660 aaKnown RBP14.26□□□□□ -0.13
DDX39B-208ENST00000428098 CHMP4BP1P59074 171 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 IKBKEQ14164 716 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 MBTPS1Q14703 1052 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 TTF1Q15361 905 aaPredicted RBP14.26□□□□□ -0.13
DDX39B-208ENST00000428098 TRAF7Q6Q0C0 670 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 SUGP1Q8IWZ8 645 aaKnown RBP14.26□□□□□ -0.13
DDX39B-208ENST00000428098 NSUN3Q9H649 340 aaKnown RBP14.26□□□□□ -0.13
DDX39B-208ENST00000428098 TLR9Q9NR96 1032 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 KMT2EQ8IZD2 1858 aa14.26□□□□□ -0.13
DDX39B-208ENST00000428098 GREB1LQ9C091 1923 aaPredicted RBP14.25□□□□□ -0.13
DDX39B-208ENST00000428098 VPS13AQ96RL7 3174 aa14.25□□□□□ -0.13
DDX39B-208ENST00000428098 GOLIM4O00461 696 aa14.25□□□□□ -0.13
DDX39B-208ENST00000428098 KRT37O76014 449 aa14.25□□□□□ -0.13
DDX39B-208ENST00000428098 CKBP12277 381 aa14.25□□□□□ -0.13
DDX39B-208ENST00000428098 GTF2F1P35269 517 aaKnown RBP eCLIP14.25□□□□□ -0.13
DDX39B-208ENST00000428098 HYAL1Q12794 435 aa14.25□□□□□ -0.13
DDX39B-208ENST00000428098 MKRN4PQ13434 485 aaPredicted RBP14.25□□□□□ -0.13
DDX39B-208ENST00000428098 AACSQ86V21 672 aa14.25□□□□□ -0.13
DDX39B-208ENST00000428098 CAGE1Q8TC20 777 aa14.25□□□□□ -0.13
DDX39B-208ENST00000428098 CHMP4CQ96CF2 233 aa14.25□□□□□ -0.13
DDX39B-208ENST00000428098 POP1Q99575 1024 aaKnown RBP14.25□□□□□ -0.13
DDX39B-208ENST00000428098 COL4A6Q14031 1691 aa14.25□□□□□ -0.13
DDX39B-208ENST00000428098 ZBED9Q6R2W3 1325 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 LCTP09848 1927 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 TMEM232C9JQI7 657 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 TRIM27P14373 513 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 RBL2Q08999 1139 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 TKFCQ3LXA3 575 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 TMEM192Q8IY95 271 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 WNT8BQ93098 351 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 FSD1Q9BTV5 496 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 C1orf115Q9H7X2 142 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 TRPC6Q9Y210 931 aa14.24□□□□□ -0.13
DDX39B-208ENST00000428098 ZNF292O60281 2723 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 LINC01565O15544 149 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 KPNA6O60684 536 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 BMP3P12645 472 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 ADD2P35612 726 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 ID4P47928 161 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 BAATQ14032 418 aaPredicted RBP14.23□□□□□ -0.13
DDX39B-208ENST00000428098 SLFN13Q68D06 897 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 NSMFQ6X4W1 530 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 LRRC47Q8N1G4 583 aaKnown RBP14.23□□□□□ -0.13
DDX39B-208ENST00000428098 KAT2BQ92831 832 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 CLUAP1Q96AJ1 413 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 ASIC4Q96FT7 647 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 SLC4A4Q9Y6R1 1079 aa14.23□□□□□ -0.13
DDX39B-208ENST00000428098 KMT2BQ9UMN6 2715 aaPredicted RBP14.23□□□□□ -0.13
DDX39B-208ENST00000428098 PRR23AA6NEV1 266 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 LOC730098B7Z3J9 87 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 EFCAB14O75071 495 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 TBX10O75333 385 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 LGR5O75473 907 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 CT47B1P0C2W7 299 aaPredicted RBP14.22□□□□□ -0.13
DDX39B-208ENST00000428098 FDX1P10109 184 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 ALDH5A1P51649 535 aaPredicted RBP14.22□□□□□ -0.13
DDX39B-208ENST00000428098 TRIM71Q2Q1W2 868 aaKnown RBP14.22□□□□□ -0.13
DDX39B-208ENST00000428098 ZNF618Q5T7W0 954 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 RPAP2Q8IXW5 612 aaPredicted RBP14.22□□□□□ -0.13
DDX39B-208ENST00000428098 AMOTL1Q8IY63 956 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 MYOCDQ8IZQ8 938 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 CCDC155Q8N6L0 562 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 GMCL1P1Q8NEA9 526 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 STAG1Q8WVM7 1258 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 CEP95Q96GE4 821 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 DNAJC2Q99543 621 aaKnown RBP14.22□□□□□ -0.13
DDX39B-208ENST00000428098 MTMR4Q9NYA4 1195 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 NCOR2Q9Y618 2525 aa14.22□□□□□ -0.13
DDX39B-208ENST00000428098 GRM6O15303 877 aa14.21□□□□□ -0.13
DDX39B-208ENST00000428098 NCK2O43639 380 aa14.21□□□□□ -0.13
DDX39B-208ENST00000428098 PARNO95453 639 aaKnown RBP14.21□□□□□ -0.13
DDX39B-208ENST00000428098 SMAD4Q13485 552 aaKnown RBP14.21□□□□□ -0.13
DDX39B-208ENST00000428098 SESTD1Q86VW0 696 aa14.21□□□□□ -0.13
DDX39B-208ENST00000428098 FBXO11Q86XK2 927 aa14.21□□□□□ -0.13
DDX39B-208ENST00000428098 DBF4BQ8NFT6 615 aa14.21□□□□□ -0.13
DDX39B-208ENST00000428098 SAMD11Q96NU1 681 aa14.21□□□□□ -0.13
DDX39B-208ENST00000428098 IRF2BPLQ9H1B7 796 aa14.21□□□□□ -0.13
DDX39B-208ENST00000428098 MKNK2Q9HBH9 465 aa14.21□□□□□ -0.13
DDX39B-208ENST00000428098 IL1RAPL2Q9NP60 686 aa14.21□□□□□ -0.13
DDX39B-208ENST00000428098 MED19A0JLT2 244 aaPredicted RBP14.2□□□□□ -0.14
DDX39B-208ENST00000428098 ARIH2O95376 493 aa14.2□□□□□ -0.14
DDX39B-208ENST00000428098 PDGFBP01127 241 aaPredicted RBP14.2□□□□□ -0.14
DDX39B-208ENST00000428098 SIGLEC14Q08ET2 396 aa14.2□□□□□ -0.14
DDX39B-208ENST00000428098 ADAM15Q13444 863 aa14.2□□□□□ -0.14
DDX39B-208ENST00000428098 CBX2Q14781 532 aaPredicted RBP14.2□□□□□ -0.14
DDX39B-208ENST00000428098 BRDTQ58F21 947 aaPredicted RBP14.2□□□□□ -0.14
DDX39B-208ENST00000428098 TMEM57Q8N5G2 664 aa14.2□□□□□ -0.14
DDX39B-208ENST00000428098 CHURC1Q8WUH1 139 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms