RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 RIC8AQ9NPQ8 531 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 PNMA3Q9UL41 463 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 PPP1R9AQ9ULJ8 1098 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 NOL7Q9UMY1 257 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 ADAMTS5Q9UNA0 930 aa9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 MRPL11Q9Y3B7 192 aaKnown RBP9.44□□□□□ -0.9
SMARCAL1-206ENST00000427645 ABCB11O95342 1321 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 CCDC194A0A1B0GVG4 234 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 FOSP01100 380 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 HMGCRP04035 888 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 ICAM1P05362 532 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 GCLCP48506 637 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 ADCY7P51828 1080 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 DNM1Q05193 864 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 NFKBIBQ15653 356 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 SKOR2Q2VWA4 1001 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 Q3C1V9 767 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 MYSM1Q5VVJ2 828 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 POTEEQ6S8J3 1075 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 KRT25Q7Z3Z0 450 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 MCF2L2Q86YR7 1114 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 SLC17A8Q8NDX2 589 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 SLC38A10Q9HBR0 1119 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 HMX1Q9NP08 348 aaPredicted RBP9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 MAP3K20Q9NYL2 800 aaKnown RBP9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 CEP131Q9UPN4 1083 aa9.43□□□□□ -0.9
SMARCAL1-206ENST00000427645 MGAMO43451 1857 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 ELP1O95163 1332 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 RPTORQ8N122 1335 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 M0R2N6 131 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 VWA5AO00534 786 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 ATP2A1O14983 1001 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 BMP15O95972 392 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 PRKAR2AP13861 404 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 IRX3P78415 501 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 NPY5RQ15761 445 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 CCL14Q16627 93 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 FOXD4L6Q3SYB3 417 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 TYW1BQ6NUM6 668 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 FOXD4L3Q6VB84 417 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 Q7L0L9 218 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 REXO1Q8N1G1 1221 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 MB21D1Q8N884 522 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 GTF3C2Q8WUA4 911 aaPredicted RBP9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 TNFRSF25Q93038 417 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 SPATA32Q96LK8 384 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 PAGR1Q9BTK6 254 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 PORCNQ9H237 461 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 FBXO28Q9NVF7 368 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 POLR3EQ9NVU0 708 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 RTEL1Q9NZ71 1219 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 TFIP11Q9UBB9 837 aaKnown RBP9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 RBPJLQ9UBG7 517 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 RCOR1Q9UKL0 485 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 PCDHA6Q9UN73 950 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 PCDHA8Q9Y5H6 950 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 A0A0C4DFX4 3053 aa9.42□□□□□ -0.9
SMARCAL1-206ENST00000427645 TCHHQ07283 1943 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 GOLGA6L4A6NEF3 574 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 KIF28PB7ZC32 967 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 PIK3CDO00329 1044 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 DLL1O00548 723 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 RIOK3O14730 519 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 PPP1R11O60927 126 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 PRPF40AO75400 957 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 YEATS4O95619 227 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 CCND3P30281 292 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 HERVK_113P62684 666 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 NR5A1Q13285 461 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 AP3B2Q13367 1082 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 NONOQ15233 471 aaKnown RBP eCLIP9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 SF3A1Q15459 793 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 TKFCQ3LXA3 575 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 ANO1Q5XXA6 986 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 FAM173BQ6P4H8 233 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 CCDC174Q6PII3 467 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 LBX2Q6XYB7 198 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 TMEM87AQ8NBN3 555 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 GPRC5AQ8NFJ5 357 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 KCNG4Q8TDN1 519 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 OXER1Q8TDS5 423 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 NAP1L4Q99733 375 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 GDF15Q99988 308 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 C11orf49Q9H6J7 331 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 MORF4L1Q9UBU8 362 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 CCPG1Q9ULG6 757 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 CNPY2Q9Y2B0 182 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 FARP1Q9Y4F1 1045 aaPredicted RBP9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 PTPRFP10586 1907 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 MYH15Q9Y2K3 1946 aa9.41□□□□□ -0.9
SMARCAL1-206ENST00000427645 PFASO15067 1338 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 GCOM1H8Y6P7 765 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 PPP6R2O75170 966 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 POLR2MP0CAP2 368 aa9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 MAGEA10P43363 369 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 NASPP49321 788 aaPredicted RBP9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 CLK2P49760 499 aaKnown RBP9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 FXR2P51116 673 aaKnown RBP eCLIP9.4□□□□□ -0.9
SMARCAL1-206ENST00000427645 USP11P51784 963 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms