RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 KDM5AP29375 1690 aaKnown RBP14.39□□□□□ -0.11
SPG11-202ENST00000427534 HABP4Q5JVS0 413 aaKnown RBP14.39□□□□□ -0.11
SPG11-202ENST00000427534 SPDYE1Q8NFV5 336 aaPredicted RBP14.39□□□□□ -0.11
SPG11-202ENST00000427534 LMCD1Q9NZU5 365 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 FLAD1Q8NFF5 587 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 TACO1Q9BSH4 297 aaKnown RBP14.39□□□□□ -0.11
SPG11-202ENST00000427534 XPO4Q9C0E2 1151 aaKnown RBP14.39□□□□□ -0.11
SPG11-202ENST00000427534 RAVER2Q9HCJ3 691 aaKnown RBP14.39□□□□□ -0.11
SPG11-202ENST00000427534 AMFRQ9UKV5 643 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 STAT2P52630 851 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 PPP4R1Q8TF05 950 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 ANKRD36BP1Q96IX9 119 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 ANAPC5Q9UJX4 755 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 MBD5Q9P267 1494 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 KDM3AQ9Y4C1 1321 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 POC1B-GALNT4F8VUJ3 575 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 EBAG9O00559 213 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 METTL23Q86XA0 190 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 ZNF18P17022 549 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 PSMD2Q13200 908 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 PDE1CQ14123 709 aaPredicted RBP14.39□□□□□ -0.11
SPG11-202ENST00000427534 SLC38A10Q9HBR0 1119 aa14.39□□□□□ -0.11
SPG11-202ENST00000427534 KRIT1O00522 736 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 AFAP1L1Q8TED9 768 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 GDAQ9Y2T3 454 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 AATKQ6ZMQ8 1374 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.38□□□□□ -0.117e-9■■■□□ 17.9
SPG11-202ENST00000427534 CIAPIN1Q6FI81 312 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 FAM117BQ6P1L5 589 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 SLFN12Q8IYM2 578 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 ZNF513Q8N8E2 541 aaPredicted RBP14.38□□□□□ -0.11
SPG11-202ENST00000427534 HACD3Q9P035 362 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 ARHGAP42A6NI28 874 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 CCNA1P78396 465 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 ZNF467Q7Z7K2 595 aaPredicted RBP14.38□□□□□ -0.11
SPG11-202ENST00000427534 PDCD6IPQ8WUM4 868 aaKnown RBP14.38□□□□□ -0.11
SPG11-202ENST00000427534 TSC1Q92574 1164 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 NT5C3AQ9H0P0 336 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 TDRD3Q9H7E2 651 aaKnown RBP14.38□□□□□ -0.11
SPG11-202ENST00000427534 ATP1A2P50993 1020 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 RASSF7Q02833 373 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 RWDD4Q6NW29 188 aaKnown RBP14.38□□□□□ -0.11
SPG11-202ENST00000427534 GCC2Q8IWJ2 1684 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 RPN1P04843 607 aaKnown RBP14.38□□□□□ -0.11
SPG11-202ENST00000427534 CACNB2Q08289 660 aaPredicted RBP14.38□□□□□ -0.11
SPG11-202ENST00000427534 SUPT20HL1Q3ZLR7 823 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 PRAMEF18Q5VWM3 479 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 NOSTRINQ8IVI9 506 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 AFAP1L2Q8N4X5 818 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 TTLL1O95922 423 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 ACTN1P12814 892 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 SESN3P58005 492 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 PKP1Q13835 747 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 ZNF589Q86UQ0 364 aaPredicted RBP14.38□□□□□ -0.11
SPG11-202ENST00000427534 VSIG1Q86XK7 387 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 IFT20Q8IY31 132 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 HSPH1Q92598 858 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 CCDC68Q9H2F9 335 aa14.38□□□□□ -0.11
SPG11-202ENST00000427534 ATP5DP30049 168 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 NDUFA8P51970 172 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 SRGAP1Q7Z6B7 1085 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 OTUD5Q96G74 571 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 ZNF274Q96GC6 653 aaPredicted RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 USP28Q96RU2 1077 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 FAM114A2Q9NRY5 505 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 POLR3EQ9NVU0 708 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 ERVK-7P63135 1459 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 CYP2D6P10635 497 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 IREB2P48200 963 aaKnown RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 SCRN1Q12765 414 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 SZRD1Q7Z422 152 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 BANK1Q8NDB2 785 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 ZNF148Q9UQR1 794 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 ZMYM6O95789 1325 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 METP08581 1390 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 MYOM2P54296 1465 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 ATICP31939 592 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 GTF2A1P52655 376 aaPredicted RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 CCDC93Q567U6 631 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 CFAP36Q96G28 342 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 ANGPTL3Q9Y5C1 460 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 ENC1O14682 589 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 TUBBP07437 444 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 JADE1Q6IE81 842 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 CCDC62Q6P9F0 684 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 TEX2Q8IWB9 1127 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 SH3RF3Q8TEJ3 882 aaPredicted RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 HEXIM2Q96MH2 286 aaKnown RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 ZHX2Q9Y6X8 837 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 YWHAEP62258 255 aaKnown RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 BFSP1Q12934 665 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 HADHQ16836 314 aaKnown RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 DSTYKQ6XUX3 929 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 TRMT2AQ8IZ69 625 aaKnown RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 NUF2Q9BZD4 464 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 DNAJC17Q9NVM6 304 aaKnown RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 DDX41Q9UJV9 622 aaKnown RBP14.37□□□□□ -0.11
SPG11-202ENST00000427534 ADGBQ8N7X0 1667 aa14.37□□□□□ -0.11
SPG11-202ENST00000427534 SUSD4Q5VX71 490 aa14.36□□□□□ -0.11
SPG11-202ENST00000427534 TBCKQ8TEA7 893 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms