RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 A0A1W2PQ27 194 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 A0A1W2PQ64 194 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 A0A1W2PQD8 194 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 SMCO2A6NFE2 343 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 GLE1Q53GS7 698 aaKnown RBP15.65■□□□□ 0.1
PTPN13-203ENST00000427191 FAM102BQ5T8I3 360 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 NFATC2IPQ8NCF5 419 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 TEKT3Q9BXF9 490 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 GCC2Q8IWJ2 1684 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 KDRP35968 1356 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 TLR3O15455 904 aaKnown RBP15.65■□□□□ 0.1
PTPN13-203ENST00000427191 ANXA1P04083 346 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 PAMP19021 973 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 SCYL2Q6P3W7 929 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 NUDCD1Q96RS6 583 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 GRIN2AQ12879 1464 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 WDR17Q8IZU2 1322 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 H7C0C1 242 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 RPN1P04843 607 aaKnown RBP15.65■□□□□ 0.1
PTPN13-203ENST00000427191 ATP5OP48047 213 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 MYL7Q01449 175 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 DMTNQ08495 405 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 SPOUT1Q5T280 376 aaKnown RBP15.65■□□□□ 0.1
PTPN13-203ENST00000427191 OR9Q1Q8NGQ5 310 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 LMBRD1Q9NUN5 540 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 PFKFB1P16118 471 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 NEK2P51955 445 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 TMED1Q13445 227 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 FSCBQ5H9T9 825 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 ARHGAP18Q8N392 663 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 POLE3Q9NRF9 147 aa15.65■□□□□ 0.1
PTPN13-203ENST00000427191 DDX25Q9UHL0 483 aaKnown RBP15.65■□□□□ 0.1
PTPN13-203ENST00000427191 ZNF526Q8TF50 670 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-203ENST00000427191 JARID2Q92833 1246 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-203ENST00000427191 KRT82Q9NSB4 513 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 CCT5P48643 541 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 SETD1BQ9UPS6 1966 aaKnown RBP15.64■□□□□ 0.09
PTPN13-203ENST00000427191 SERPINB10P48595 397 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 OLFM3Q96PB7 478 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 ZBTB18Q99592 522 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 RGS12O14924 1447 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 MAST1Q9Y2H9 1570 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 TMCC1O94876 653 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 TAC1P20366 129 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 ZSCAN10Q96SZ4 725 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-203ENST00000427191 PSTPIP2Q9H939 334 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 ZFXP17010 805 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-203ENST00000427191 DCAF15Q66K64 600 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 FAM193BQ96PV7 902 aaPredicted RBP15.64■□□□□ 0.09
PTPN13-203ENST00000427191 STK32BQ9NY57 414 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 SBNO1A3KN83 1393 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 CREB3O43889 395 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 ALDH1B1P30837 517 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 C16orf87Q6PH81 154 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 NELFCDQ8IXH7 590 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 ANKRD36BP1Q96IX9 119 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 MMS19Q96T76 1030 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 NOP53Q9NZM5 478 aaKnown RBP15.64■□□□□ 0.09
PTPN13-203ENST00000427191 GINS2Q9Y248 185 aa15.64■□□□□ 0.09
PTPN13-203ENST00000427191 RNMTO43148 476 aaKnown RBP15.63■□□□□ 0.09
PTPN13-203ENST00000427191 SPAG7O75391 227 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 TCIRG1Q13488 830 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 TSC22D3Q99576 134 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 GIMAP4Q9NUV9 329 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 SLC8A2Q9UPR5 921 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 EDC4Q6P2E9 1401 aaKnown RBP15.63■□□□□ 0.09
PTPN13-203ENST00000427191 ECM2O94769 699 aaPredicted RBP15.63■□□□□ 0.09
PTPN13-203ENST00000427191 POLR2MP0CAP2 368 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 LONRF3Q496Y0 759 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 NT5C1BQ96P26 610 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 IKBKBO14920 756 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 CTNND1O60716 968 aaKnown RBP15.63■□□□□ 0.09
PTPN13-203ENST00000427191 ARHGAP10A1A4S6 786 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 BRD1O95696 1058 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 THOC5Q13769 683 aaKnown RBP15.63■□□□□ 0.09
PTPN13-203ENST00000427191 EMBQ6PCB8 327 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 TMEM60Q9H2L4 133 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 TMEM232C9JQI7 657 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 CFBP00751 764 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 SURF1Q15526 300 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 SUN2Q9UH99 717 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 ADAM9Q13443 819 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 SGO2Q562F6 1265 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 NDUFAF2Q8N183 169 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 IL1RL1Q01638 556 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 CAV1Q03135 178 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 ELMSAN1Q6PJG2 1045 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 PCGF5Q86SE9 256 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 ARHGAP26Q9UNA1 814 aa15.63■□□□□ 0.09
PTPN13-203ENST00000427191 MAGOHBQ96A72 148 aaKnown RBP15.62■□□□□ 0.09
PTPN13-203ENST00000427191 AATFQ9NY61 560 aaKnown RBP eCLIP15.62■□□□□ 0.09
PTPN13-203ENST00000427191 DDX39AO00148 427 aaKnown RBP15.62■□□□□ 0.09
PTPN13-203ENST00000427191 METTL13Q8N6R0 699 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 KDM5DQ9BY66 1539 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 UGGT2Q9NYU1 1516 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 GCFC2P16383 781 aaKnown RBP15.62■□□□□ 0.09
PTPN13-203ENST00000427191 ATP5JP18859 108 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 USH1GQ495M9 461 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 CRLF3Q8IUI8 442 aa15.62■□□□□ 0.09
PTPN13-203ENST00000427191 CATSPER1Q8NEC5 780 aa15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms