RNA–Protein interactions for RNA: ENST00000426658.6

CTCFL-206, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 3,996 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-206ENST00000426658 IFFO1Q0D2I5 559 aa11.32□□□□□ -0.6
CTCFL-206ENST00000426658 ZFYVE27Q5T4F4 411 aa11.32□□□□□ -0.6
CTCFL-206ENST00000426658 WDR78Q5VTH9 848 aa11.32□□□□□ -0.6
CTCFL-206ENST00000426658 AENQ8WTP8 325 aaKnown RBP11.32□□□□□ -0.6
CTCFL-206ENST00000426658 RAB34Q9BZG1 259 aa11.32□□□□□ -0.6
CTCFL-206ENST00000426658 GPCPD1Q9NPB8 672 aa11.32□□□□□ -0.6
CTCFL-206ENST00000426658 AGPSO00116 658 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 BAG3O95817 575 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 USP17L8P0C7I0 530 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 NR1D1P20393 614 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 TNNC1P63316 161 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 LRRC41Q15345 812 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 PKN1Q16512 942 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 WDR59Q6PJI9 974 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 CCDC84Q86UT8 332 aaPredicted RBP11.31□□□□□ -0.6
CTCFL-206ENST00000426658 HPS3Q969F9 1004 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 IQCDQ96DY2 449 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 TSKSQ9UJT2 592 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 ARHGAP23Q9P227 1491 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 WNT7AO00755 349 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 MEFVO15553 781 aaPredicted RBP11.31□□□□□ -0.6
CTCFL-206ENST00000426658 KRT14P02533 472 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 POLD1P28340 1107 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 CNNM4Q6P4Q7 775 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 CXorf56Q9H5V9 222 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 SLIT3O75094 1523 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 ESYT3A0FGR9 886 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 RCCD1A6NED2 376 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 MYO1FO00160 1098 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 GUCY1A3Q02108 690 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 SCLT1Q96NL6 688 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 KRT12Q99456 494 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 TRIM31Q9BZY9 425 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 C6orf50Q9HD87 102 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 EHD2Q9NZN4 543 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 AFF2P51816 1311 aa11.31□□□□□ -0.6
CTCFL-206ENST00000426658 SHOX2O60902 331 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-206ENST00000426658 LDHBP07195 334 aaKnown RBP11.3□□□□□ -0.6
CTCFL-206ENST00000426658 GNAQP50148 359 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 PMS1P54277 932 aaKnown RBP11.3□□□□□ -0.6
CTCFL-206ENST00000426658 SV2BQ7L1I2 683 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 ZIM3Q96PE6 472 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 CCDC87Q9NVE4 849 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 CAPN6Q9Y6Q1 641 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 AFDNP55196 1824 aaKnown RBP11.3□□□□□ -0.6
CTCFL-206ENST00000426658 USP17L3A6NCW0 530 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 USP17L4A6NCW7 530 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 ZNF76P36508 570 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 KRT79Q5XKE5 535 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 USP17L1Q7RTZ2 530 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 RUBCNQ92622 972 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 PNPLA7Q6ZV29 1317 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 RGPD2P0DJD1 1756 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 GCOM1H8Y6P7 765 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-206ENST00000426658 MYL1P05976 194 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 PLEKP08567 350 aaPredicted RBP11.3□□□□□ -0.6
CTCFL-206ENST00000426658 MYZAPP0CAP1 466 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 SLC9C1Q4G0N8 1177 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 SH2D4AQ9H788 454 aa11.3□□□□□ -0.6
CTCFL-206ENST00000426658 CACNB1Q02641 598 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 KCNB1Q14721 858 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 DCAF17Q5H9S7 520 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 SNX29Q8TEQ0 813 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 ZNF526Q8TF50 670 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 ZNF287Q9HBT7 754 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 SMCO2A6NFE2 343 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 EZRP15311 586 aaKnown RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 PRDX5P30044 214 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 LSP1P33241 339 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 GLE1Q53GS7 698 aaKnown RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 TPTE2Q6XPS3 522 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 CPLX4Q7Z7G2 160 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 CREG2Q8IUH2 290 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 SRBD1Q8N5C6 995 aaKnown RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 SLC44A5Q8NCS7 719 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 KAT2BQ92831 832 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 MST1RQ04912 1400 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 TLDC2A0PJX2 215 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 MEA1Q16626 185 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 SWT1Q5T5J6 900 aaKnown RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 FRMPD2Q68DX3 1309 aaPredicted RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 ANKRD40Q6AI12 368 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 CCDC155Q8N6L0 562 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 TSEN2Q8NCE0 465 aaKnown RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 KANSL2Q9H9L4 492 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 RBM12Q9NTZ6 932 aaKnown RBP11.29□□□□□ -0.6
CTCFL-206ENST00000426658 TACC3Q9Y6A5 838 aa11.29□□□□□ -0.6
CTCFL-206ENST00000426658 CHUKO15111 745 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 CRKLP46109 303 aaKnown RBP11.28□□□□□ -0.6
CTCFL-206ENST00000426658 NONOQ15233 471 aaKnown RBP eCLIP11.28□□□□□ -0.6
CTCFL-206ENST00000426658 SEC23AQ15436 765 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 IRF2BP1Q8IU81 584 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 UBLCP1Q8WVY7 318 aaPredicted RBP11.28□□□□□ -0.6
CTCFL-206ENST00000426658 MS4A14Q96JA4 679 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 RNPC3Q96LT9 517 aaKnown RBP11.28□□□□□ -0.6
CTCFL-206ENST00000426658 CARD10Q9BWT7 1032 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 EPN3Q9H201 632 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 PPP1R37O75864 691 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 FTCDO95954 541 aa11.28□□□□□ -0.6
CTCFL-206ENST00000426658 PLCG1P19174 1290 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms