RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 TRIM43BA6NCK2 446 aa22.79■■□□□ 1.24
FBXO28-202ENST00000424254 CENPBP07199 599 aaPredicted RBP22.79■■□□□ 1.24
FBXO28-202ENST00000424254 EIF2AK2P19525 551 aaKnown RBP22.79■■□□□ 1.24
FBXO28-202ENST00000424254 HOXA13P31271 388 aaPredicted RBP22.79■■□□□ 1.24
FBXO28-202ENST00000424254 KRT32Q14532 448 aa22.79■■□□□ 1.24
FBXO28-202ENST00000424254 CXCL17Q6UXB2 119 aa22.79■■□□□ 1.24
FBXO28-202ENST00000424254 DHX32Q7L7V1 743 aaKnown RBP22.79■■□□□ 1.24
FBXO28-202ENST00000424254 CMTR1Q8N1G2 835 aaKnown RBP22.79■■□□□ 1.24
FBXO28-202ENST00000424254 SRBD1Q8N5C6 995 aaKnown RBP22.79■■□□□ 1.24
FBXO28-202ENST00000424254 KCNB2Q92953 911 aa22.79■■□□□ 1.24
FBXO28-202ENST00000424254 TRIM43Q96BQ3 446 aaPredicted RBP22.79■■□□□ 1.24
FBXO28-202ENST00000424254 CALM1P0DP23 149 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 CALM2P0DP24 149 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 CALM3P0DP25 149 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 TRAF1Q13077 416 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 PPP2R5BQ15173 497 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 ARHGEF16Q5VV41 709 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 ANKRD33Q7Z3H0 272 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 SCFD2Q8WU76 684 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 VTI1AQ96AJ9 217 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 LZTS2Q9BRK4 669 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 UBE2OQ9C0C9 1292 aaKnown RBP22.78■■□□□ 1.24
FBXO28-202ENST00000424254 PXMP2Q9NR77 195 aa22.78■■□□□ 1.24
FBXO28-202ENST00000424254 ARIH2O95376 493 aa22.77■■□□□ 1.24
FBXO28-202ENST00000424254 CLTBP09497 229 aa22.77■■□□□ 1.24
FBXO28-202ENST00000424254 SMARCA1P28370 1054 aa22.77■■□□□ 1.24
FBXO28-202ENST00000424254 HSPA4P34932 840 aa22.77■■□□□ 1.24
FBXO28-202ENST00000424254 GNAQP50148 359 aa22.77■■□□□ 1.24
FBXO28-202ENST00000424254 MICU3Q86XE3 530 aa22.77■■□□□ 1.24
FBXO28-202ENST00000424254 COPS5Q92905 334 aa22.77■■□□□ 1.24
FBXO28-202ENST00000424254 RRP36Q96EU6 259 aaKnown RBP22.77■■□□□ 1.24
FBXO28-202ENST00000424254 IWS1Q96ST2 819 aa22.77■■□□□ 1.24
FBXO28-202ENST00000424254 MAP3K20Q9NYL2 800 aaKnown RBP22.77■■□□□ 1.24
FBXO28-202ENST00000424254 A0A0U1RQG5 324 aaPredicted RBP22.76■■□□□ 1.23
FBXO28-202ENST00000424254 CDK7P50613 346 aa22.76■■□□□ 1.23
FBXO28-202ENST00000424254 FAAP100Q0VG06 881 aa22.76■■□□□ 1.23
FBXO28-202ENST00000424254 STXBP2Q15833 593 aa22.76■■□□□ 1.23
FBXO28-202ENST00000424254 SAMD3Q8N6K7 520 aa22.76■■□□□ 1.23
FBXO28-202ENST00000424254 FANCBQ8NB91 859 aa22.76■■□□□ 1.23
FBXO28-202ENST00000424254 OR6J1Q8NGC5 347 aa22.76■■□□□ 1.23
FBXO28-202ENST00000424254 TOX2Q96NM4 488 aa22.76■■□□□ 1.23
FBXO28-202ENST00000424254 LBHD1Q9BQE6 289 aaPredicted RBP22.76■■□□□ 1.23
FBXO28-202ENST00000424254 BRPF3Q9ULD4 1205 aa22.76■■□□□ 1.23
FBXO28-202ENST00000424254 GCOM1H8Y6P7 765 aaPredicted RBP22.75■■□□□ 1.23
FBXO28-202ENST00000424254 ARVCFO00192 962 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 ZEB2O60315 1214 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 REC8O95072 547 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 NR3C2P08235 984 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 POLR2MP0CAP2 368 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 TXNP10599 105 aaKnown RBP22.75■■□□□ 1.23
FBXO28-202ENST00000424254 CPA1P15085 419 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 ITGB8P26012 769 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 TTLL4Q14679 1199 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 APOA5Q6Q788 366 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 SEPT14Q6ZU15 432 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 TMTC3Q6ZXV5 915 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 PDCD2LQ9BRP1 358 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 SNX14Q9Y5W7 946 aa22.75■■□□□ 1.23
FBXO28-202ENST00000424254 DCDC2CA8MYV0 355 aa22.74■■□□□ 1.23
FBXO28-202ENST00000424254 NKRFO15226 690 aaKnown RBP eCLIP22.74■■□□□ 1.23
FBXO28-202ENST00000424254 CABYRO75952 493 aa22.74■■□□□ 1.23
FBXO28-202ENST00000424254 CCDC62Q6P9F0 684 aa22.74■■□□□ 1.23
FBXO28-202ENST00000424254 TDHQ8IZJ6 230 aa22.74■■□□□ 1.23
FBXO28-202ENST00000424254 CCDC82Q8N4S0 544 aa22.74■■□□□ 1.23
FBXO28-202ENST00000424254 BADQ92934 168 aa22.74■■□□□ 1.23
FBXO28-202ENST00000424254 SEC63Q9UGP8 760 aaKnown RBP22.74■■□□□ 1.23
FBXO28-202ENST00000424254 GRIN2DO15399 1336 aa22.73■■□□□ 1.23
FBXO28-202ENST00000424254 hCG_1642624A0A1W2PR95 340 aa22.73■■□□□ 1.23
FBXO28-202ENST00000424254 KIAA0355O15063 1070 aa22.73■■□□□ 1.23
FBXO28-202ENST00000424254 HMGB1P09429 215 aaKnown RBP22.73■■□□□ 1.23
FBXO28-202ENST00000424254 SYNE3Q6ZMZ3 975 aa22.73■■□□□ 1.23
FBXO28-202ENST00000424254 FCHSD1Q86WN1 690 aa22.73■■□□□ 1.23
FBXO28-202ENST00000424254 SLC43A3Q8NBI5 491 aa22.73■■□□□ 1.23
FBXO28-202ENST00000424254 IL31RAQ8NI17 732 aa22.73■■□□□ 1.23
FBXO28-202ENST00000424254 JAKMIP1Q96N16 626 aaKnown RBP22.73■■□□□ 1.23
FBXO28-202ENST00000424254 TMEM39AQ9NV64 488 aa22.73■■□□□ 1.23
FBXO28-202ENST00000424254 SOX1O00570 391 aaPredicted RBP22.72■■□□□ 1.23
FBXO28-202ENST00000424254 EIF3JO75822 258 aaKnown RBP22.72■■□□□ 1.23
FBXO28-202ENST00000424254 PSMC6P62333 389 aa22.72■■□□□ 1.23
FBXO28-202ENST00000424254 PGM5Q15124 567 aa22.72■■□□□ 1.23
FBXO28-202ENST00000424254 LY6KQ17RY6 165 aa22.72■■□□□ 1.23
FBXO28-202ENST00000424254 FAM126BQ8IXS8 530 aa22.72■■□□□ 1.23
FBXO28-202ENST00000424254 MROH7Q68CQ1 1323 aa22.71■■□□□ 1.23
FBXO28-202ENST00000424254 ZBTB43O43298 467 aa22.71■■□□□ 1.23
FBXO28-202ENST00000424254 RGS20O76081 388 aa22.71■■□□□ 1.23
FBXO28-202ENST00000424254 MYCLP12524 364 aaPredicted RBP22.71■■□□□ 1.23
FBXO28-202ENST00000424254 CPT1AP50416 773 aa22.71■■□□□ 1.23
FBXO28-202ENST00000424254 PURAQ00577 322 aaKnown RBP22.71■■□□□ 1.23
FBXO28-202ENST00000424254 ITGA7Q13683 1181 aa22.71■■□□□ 1.23
FBXO28-202ENST00000424254 TBX21Q9UL17 535 aa22.71■■□□□ 1.23
FBXO28-202ENST00000424254 LAMA3Q16787 3333 aa22.7■■□□□ 1.22
FBXO28-202ENST00000424254 KLF18A0A0U1RQI7 1052 aa22.7■■□□□ 1.22
FBXO28-202ENST00000424254 A6NJR5 290 aa22.7■■□□□ 1.22
FBXO28-202ENST00000424254 MYL3P08590 195 aa22.7■■□□□ 1.22
FBXO28-202ENST00000424254 VSIG10LQ86VR7 867 aa22.7■■□□□ 1.22
FBXO28-202ENST00000424254 ZFP91Q96JP5 570 aaPredicted RBP22.7■■□□□ 1.22
FBXO28-202ENST00000424254 RAG1P15918 1043 aa22.69■■□□□ 1.22
FBXO28-202ENST00000424254 ARHGAP1Q07960 439 aa22.69■■□□□ 1.22
FBXO28-202ENST00000424254 RTN1Q16799 776 aa22.69■■□□□ 1.22
FBXO28-202ENST00000424254 USP17L6PQ6QN14 398 aa22.69■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms