RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 KCNC1P48547 511 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 YARSP54577 528 aaKnown RBP7.28□□□□□ -1.24
SFXN1-202ENST00000421887 EVA1CP58658 441 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 ATP2B2Q01814 1243 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 TSNAXIP1Q2TAA8 658 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 TMC6Q7Z403 805 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 LDHDQ86WU2 507 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 TP53I13Q8NBR0 393 aaPredicted RBP7.28□□□□□ -1.24
SFXN1-202ENST00000421887 MAP6Q96JE9 813 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 KREMEN1Q96MU8 473 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 PPLO60437 1756 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 CASZ1Q86V15 1759 aa7.28□□□□□ -1.24
SFXN1-202ENST00000421887 SSU72P8A0A1W2PR75 194 aa7.27□□□□□ -1.25
SFXN1-202ENST00000421887 AKAP8O43823 692 aaKnown RBP7.27□□□□□ -1.25
SFXN1-202ENST00000421887 MPOP05164 745 aa7.27□□□□□ -1.25
SFXN1-202ENST00000421887 KIR2DL1P43626 348 aaPredicted RBP7.27□□□□□ -1.25
SFXN1-202ENST00000421887 KIR2DL2P43627 348 aaPredicted RBP7.27□□□□□ -1.25
SFXN1-202ENST00000421887 NCKAP1LP55160 1127 aa7.27□□□□□ -1.25
SFXN1-202ENST00000421887 RPL6Q02878 288 aaKnown RBP7.27□□□□□ -1.25
SFXN1-202ENST00000421887 FOXP3Q9BZS1 431 aa7.27□□□□□ -1.25
SFXN1-202ENST00000421887 GPRASP1Q5JY77 1395 aa7.27□□□□□ -1.25
SFXN1-202ENST00000421887 RGPD3A6NKT7 1758 aaPredicted RBP7.27□□□□□ -1.25
SFXN1-202ENST00000421887 RGPD4Q7Z3J3 1758 aa7.27□□□□□ -1.25
SFXN1-202ENST00000421887 UTRNP46939 3433 aa7.27□□□□□ -1.25
SFXN1-202ENST00000421887 NRXN1Q9ULB1 1477 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 ROCK1Q13464 1354 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 K7ESM1 405 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 BUB1BO60566 1050 aaPredicted RBP7.26□□□□□ -1.25
SFXN1-202ENST00000421887 UBXN11Q5T124 520 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 RNF111Q6ZNA4 994 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 AGMOQ6ZNB7 445 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 USHBP1Q8N6Y0 703 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 PMFBP1Q8TBY8 1022 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 PLCD4Q9BRC7 762 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 KNDC1Q76NI1 1749 aa7.26□□□□□ -1.25
SFXN1-202ENST00000421887 PLSCR1O15162 318 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 LIG3P49916 1009 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 RTP1P59025 263 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 RAB3GAP1Q15042 981 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 ZNF827Q17R98 1081 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 HHIPL1Q96JK4 782 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 ASPNQ9BXN1 380 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 MTFR1LQ9H019 292 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 C1orf115Q9H7X2 142 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 STK32BQ9NY57 414 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 KLHL14Q9P2G3 628 aa7.25□□□□□ -1.25
SFXN1-202ENST00000421887 FKTNO75072 461 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 ARL4AP40617 200 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 CHMP4BP1P59074 171 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 ERVFRD-1P60508 538 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 ZXDAP98168 799 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 FMR1Q06787 632 aaKnown RBP eCLIP7.24□□□□□ -1.25
SFXN1-202ENST00000421887 NMIQ13287 307 aaPredicted RBP7.24□□□□□ -1.25
SFXN1-202ENST00000421887 KIR3DS1Q14943 382 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 FERMT3Q86UX7 667 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 PDGFDQ9GZP0 370 aaPredicted RBP7.24□□□□□ -1.25
SFXN1-202ENST00000421887 TCFL5Q9UL49 500 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 ALS2Q96Q42 1657 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 TECPR2O15040 1411 aa7.24□□□□□ -1.25
SFXN1-202ENST00000421887 ABCC11Q96J66 1382 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 PLEKHH1Q9ULM0 1364 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 SBF2Q86WG5 1849 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 NUDT19A8MXV4 375 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 FFAR3O14843 346 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 HSPA6P17066 643 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 ITGAEP38570 1179 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 SLURP1P55000 103 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 CHRNA2Q15822 529 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 ZPBP2Q6X784 338 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 TCP11L2Q8N4U5 519 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 RETREG2Q8NC44 543 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 VWCEQ96DN2 955 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 CRELD1Q96HD1 420 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 USP40Q9NVE5 1235 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 KLHL3Q9UH77 587 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 PCDHA5Q9Y5H7 936 aa7.23□□□□□ -1.25
SFXN1-202ENST00000421887 TRPM3Q9HCF6 1732 aaPredicted RBP7.23□□□□□ -1.25
SFXN1-202ENST00000421887 KIAA0232Q92628 1395 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 OVOS2A0A0G2JMS6 1433 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 OVOS2A0A0J9YW53 1432 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 OVOS2Q6IE36 1432 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 TMEM82A0PJX8 343 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 TFE3P19532 575 aaPredicted RBP7.22□□□□□ -1.25
SFXN1-202ENST00000421887 LIMS1P48059 325 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 PCBP3P57721 371 aaKnown RBP7.22□□□□□ -1.25
SFXN1-202ENST00000421887 TMEM62Q0P6H9 643 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 SLFN12Q8IYM2 578 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 NGDNQ8NEJ9 315 aaKnown RBP7.22□□□□□ -1.25
SFXN1-202ENST00000421887 ENOX1Q8TC92 643 aaKnown RBP7.22□□□□□ -1.25
SFXN1-202ENST00000421887 SYTL5Q8TDW5 730 aaPredicted RBP7.22□□□□□ -1.25
SFXN1-202ENST00000421887 TCTN2Q96GX1 697 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 CCDC74BQ96LY2 380 aa7.22□□□□□ -1.25
SFXN1-202ENST00000421887 THRAP3Q9Y2W1 955 aaKnown RBP7.22□□□□□ -1.25
SFXN1-202ENST00000421887 PARP4Q9UKK3 1724 aaKnown RBP7.21□□□□□ -1.25
SFXN1-202ENST00000421887 ZC3H6P61129 1189 aaKnown RBP7.21□□□□□ -1.26
SFXN1-202ENST00000421887 SAFB2Q14151 953 aaKnown RBP eCLIP7.21□□□□□ -1.26
SFXN1-202ENST00000421887 SLC15A2Q16348 729 aa7.21□□□□□ -1.26
SFXN1-202ENST00000421887 ZFYVE27Q5T4F4 411 aa7.21□□□□□ -1.26
SFXN1-202ENST00000421887 DIEXFQ68CQ4 756 aaKnown RBP7.21□□□□□ -1.26
SFXN1-202ENST00000421887 ZSCAN29Q8IWY8 852 aaPredicted RBP7.21□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms