RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 RMDN3Q96TC7 470 aa20.94■□□□□ 0.94
UBXN11-208ENST00000421827 LRRC2Q9BYS8 371 aa20.94■□□□□ 0.94
UBXN11-208ENST00000421827 DCDC2CA8MYV0 355 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 CALM1P0DP23 149 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 CALM2P0DP24 149 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 CALM3P0DP25 149 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 PPP2R5BQ15173 497 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 ARHGEF16Q5VV41 709 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 RASEFQ8IZ41 740 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 TDHQ8IZJ6 230 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 SAMD3Q8N6K7 520 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 LZTS2Q9BRK4 669 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 SPZ1Q9BXG8 430 aa20.93■□□□□ 0.94
UBXN11-208ENST00000421827 MAP3K20Q9NYL2 800 aaKnown RBP20.93■□□□□ 0.94
UBXN11-208ENST00000421827 ARVCFO00192 962 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 NKRFO15226 690 aaKnown RBP eCLIP20.92■□□□□ 0.94
UBXN11-208ENST00000421827 CABYRO75952 493 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 SMARCA1P28370 1054 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 GNAQP50148 359 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 CDK7P50613 346 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 KRT32Q14532 448 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 STXBP2Q15833 593 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 CXCL17Q6UXB2 119 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 PIBF1Q8WXW3 757 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 SLC12A7Q9Y666 1083 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 MROH7Q68CQ1 1323 aa20.92■□□□□ 0.94
UBXN11-208ENST00000421827 TXNP10599 105 aaKnown RBP20.91■□□□□ 0.94
UBXN11-208ENST00000421827 EIF2AK2P19525 551 aaKnown RBP20.91■□□□□ 0.94
UBXN11-208ENST00000421827 EXOSC10Q01780 885 aaKnown RBP20.91■□□□□ 0.94
UBXN11-208ENST00000421827 FAAP100Q0VG06 881 aa20.91■□□□□ 0.94
UBXN11-208ENST00000421827 TTLL4Q14679 1199 aa20.91■□□□□ 0.94
UBXN11-208ENST00000421827 ADCK5Q3MIX3 580 aa20.91■□□□□ 0.94
UBXN11-208ENST00000421827 SGMS1Q86VZ5 419 aa20.91■□□□□ 0.94
UBXN11-208ENST00000421827 OR6J1Q8NGC5 347 aa20.91■□□□□ 0.94
UBXN11-208ENST00000421827 RRP36Q96EU6 259 aaKnown RBP20.91■□□□□ 0.94
UBXN11-208ENST00000421827 PXMP2Q9NR77 195 aa20.91■□□□□ 0.94
UBXN11-208ENST00000421827 TMEM39AQ9NV64 488 aa20.91■□□□□ 0.94
UBXN11-208ENST00000421827 PPP4R2Q9NY27 417 aa20.91■□□□□ 0.94
UBXN11-208ENST00000421827 KIAA0355O15063 1070 aa20.9■□□□□ 0.94
UBXN11-208ENST00000421827 PLEKHA8P1O95397 391 aa20.9■□□□□ 0.94
UBXN11-208ENST00000421827 RXRAP19793 462 aa20.9■□□□□ 0.94
UBXN11-208ENST00000421827 HOXA13P31271 388 aaPredicted RBP20.9■□□□□ 0.94
UBXN11-208ENST00000421827 CPT1AP50416 773 aa20.9■□□□□ 0.94
UBXN11-208ENST00000421827 ERICH6BQ5W0A0 696 aa20.9■□□□□ 0.94
UBXN11-208ENST00000421827 DHX32Q7L7V1 743 aaKnown RBP20.9■□□□□ 0.94
UBXN11-208ENST00000421827 BADQ92934 168 aa20.9■□□□□ 0.94
UBXN11-208ENST00000421827 LAMA3Q16787 3333 aa20.9■□□□□ 0.94
UBXN11-208ENST00000421827 LTBP2Q14767 1821 aa20.9■□□□□ 0.94
UBXN11-208ENST00000421827 GCOM1H8Y6P7 765 aaPredicted RBP20.89■□□□□ 0.93
UBXN11-208ENST00000421827 ARIH2O95376 493 aa20.89■□□□□ 0.93
UBXN11-208ENST00000421827 NR3C2P08235 984 aa20.89■□□□□ 0.93
UBXN11-208ENST00000421827 POLR2MP0CAP2 368 aa20.89■□□□□ 0.93
UBXN11-208ENST00000421827 SEPT14Q6ZU15 432 aa20.89■□□□□ 0.93
UBXN11-208ENST00000421827 RAB11FIP4Q86YS3 637 aa20.89■□□□□ 0.93
UBXN11-208ENST00000421827 SRBD1Q8N5C6 995 aaKnown RBP20.89■□□□□ 0.93
UBXN11-208ENST00000421827 FANCBQ8NB91 859 aa20.89■□□□□ 0.93
UBXN11-208ENST00000421827 SLC43A3Q8NBI5 491 aa20.89■□□□□ 0.93
UBXN11-208ENST00000421827 COPS5Q92905 334 aa20.89■□□□□ 0.93
UBXN11-208ENST00000421827 POLR3EQ9NVU0 708 aa20.89■□□□□ 0.93
UBXN11-208ENST00000421827 SEC63Q9UGP8 760 aaKnown RBP20.89■□□□□ 0.93
UBXN11-208ENST00000421827 SOX1O00570 391 aaPredicted RBP20.88■□□□□ 0.93
UBXN11-208ENST00000421827 EIF3JO75822 258 aaKnown RBP20.88■□□□□ 0.93
UBXN11-208ENST00000421827 RAG1P15918 1043 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 ITGB8P26012 769 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 ITGA7Q13683 1181 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 LRIT3Q3SXY7 679 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 BRDTQ58F21 947 aaPredicted RBP20.88■□□□□ 0.93
UBXN11-208ENST00000421827 CCDC62Q6P9F0 684 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 SYNE3Q6ZMZ3 975 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 KCNB2Q92953 911 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 TCEANC2Q96MN5 208 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 PDCD2LQ9BRP1 358 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 SEZ6LQ9BYH1 1024 aa20.88■□□□□ 0.93
UBXN11-208ENST00000421827 TLR3O15455 904 aaKnown RBP20.87■□□□□ 0.93
UBXN11-208ENST00000421827 REC8O95072 547 aa20.87■□□□□ 0.93
UBXN11-208ENST00000421827 CENPBP07199 599 aaPredicted RBP20.87■□□□□ 0.93
UBXN11-208ENST00000421827 HMGB1P09429 215 aaKnown RBP20.87■□□□□ 0.93
UBXN11-208ENST00000421827 APOA5Q6Q788 366 aa20.87■□□□□ 0.93
UBXN11-208ENST00000421827 MICU3Q86XE3 530 aa20.87■□□□□ 0.93
UBXN11-208ENST00000421827 FAM126BQ8IXS8 530 aa20.87■□□□□ 0.93
UBXN11-208ENST00000421827 CMTR1Q8N1G2 835 aaKnown RBP20.87■□□□□ 0.93
UBXN11-208ENST00000421827 TBX21Q9UL17 535 aa20.87■□□□□ 0.93
UBXN11-208ENST00000421827 SZT2Q5T011 3432 aa20.87■□□□□ 0.93
UBXN11-208ENST00000421827 GRIN2DO15399 1336 aa20.86■□□□□ 0.93
UBXN11-208ENST00000421827 A6NJR5 290 aa20.86■□□□□ 0.93
UBXN11-208ENST00000421827 MYL3P08590 195 aa20.86■□□□□ 0.93
UBXN11-208ENST00000421827 MYCLP12524 364 aaPredicted RBP20.86■□□□□ 0.93
UBXN11-208ENST00000421827 HSPA4P34932 840 aa20.86■□□□□ 0.93
UBXN11-208ENST00000421827 PSMC6P62333 389 aa20.86■□□□□ 0.93
UBXN11-208ENST00000421827 PURAQ00577 322 aaKnown RBP20.86■□□□□ 0.93
UBXN11-208ENST00000421827 PGM5Q15124 567 aa20.86■□□□□ 0.93
UBXN11-208ENST00000421827 LY6KQ17RY6 165 aa20.86■□□□□ 0.93
UBXN11-208ENST00000421827 TMTC3Q6ZXV5 915 aa20.86■□□□□ 0.93
UBXN11-208ENST00000421827 FCHSD1Q86WN1 690 aa20.86■□□□□ 0.93
UBXN11-208ENST00000421827 GH1P01241 217 aa20.85■□□□□ 0.93
UBXN11-208ENST00000421827 CD4P01730 458 aa20.85■□□□□ 0.93
UBXN11-208ENST00000421827 VSIG10LQ86VR7 867 aa20.85■□□□□ 0.93
UBXN11-208ENST00000421827 CCDC82Q8N4S0 544 aa20.85■□□□□ 0.93
UBXN11-208ENST00000421827 LRCH3Q96II8 777 aa20.85■□□□□ 0.93
UBXN11-208ENST00000421827 MTG1Q9BT17 334 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms