RNA–Protein interactions for RNA: ENST00000420482.5

PTPN4-202, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-202ENST00000420482 MTG1Q9BT17 334 aaPredicted RBP24.81■■□□□ 1.56
PTPN4-202ENST00000420482 MTIF3Q9H2K0 278 aaKnown RBP24.81■■□□□ 1.56
PTPN4-202ENST00000420482 TMEM265A0A087WTH1 108 aa24.8■■□□□ 1.56
PTPN4-202ENST00000420482 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.8■■□□□ 1.56
PTPN4-202ENST00000420482 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.8■■□□□ 1.56
PTPN4-202ENST00000420482 E7EWF7 191 aa24.8■■□□□ 1.56
PTPN4-202ENST00000420482 ZBTB5O15062 677 aa24.8■■□□□ 1.56
PTPN4-202ENST00000420482 TMEM63BQ5T3F8 832 aa24.8■■□□□ 1.56
PTPN4-202ENST00000420482 STAG2Q8N3U4 1231 aa24.8■■□□□ 1.56
PTPN4-202ENST00000420482 SAMD3Q8N6K7 520 aa24.8■■□□□ 1.56
PTPN4-202ENST00000420482 MAD2L2Q9UI95 211 aa24.8■■□□□ 1.56
PTPN4-202ENST00000420482 MYH6P13533 1939 aa24.79■■□□□ 1.56
PTPN4-202ENST00000420482 CFBP00751 764 aa24.79■■□□□ 1.56
PTPN4-202ENST00000420482 CSF2RAP15509 400 aa24.79■■□□□ 1.56
PTPN4-202ENST00000420482 PTGS1P23219 599 aa24.79■■□□□ 1.56
PTPN4-202ENST00000420482 PSMC6P62333 389 aa24.79■■□□□ 1.56
PTPN4-202ENST00000420482 PURAQ00577 322 aaKnown RBP24.79■■□□□ 1.56
PTPN4-202ENST00000420482 MAP4K1Q92918 833 aa24.79■■□□□ 1.56
PTPN4-202ENST00000420482 TAAR1Q96RJ0 339 aa24.79■■□□□ 1.56
PTPN4-202ENST00000420482 CDX2Q99626 313 aaPredicted RBP24.79■■□□□ 1.56
PTPN4-202ENST00000420482 SEMA6BQ9H3T3 888 aa24.79■■□□□ 1.56
PTPN4-202ENST00000420482 PALM3A6NDB9 673 aaPredicted RBP24.78■■□□□ 1.56
PTPN4-202ENST00000420482 CATIPQ7Z7H3 387 aa24.78■■□□□ 1.56
PTPN4-202ENST00000420482 BUD13Q9BRD0 619 aaKnown RBP eCLIP24.78■■□□□ 1.56
PTPN4-202ENST00000420482 TTYH1Q9H313 450 aaPredicted RBP24.78■■□□□ 1.56
PTPN4-202ENST00000420482 PCDHA1Q9Y5I3 950 aa24.78■■□□□ 1.56
PTPN4-202ENST00000420482 GRIN2DO15399 1336 aa24.78■■□□□ 1.56
PTPN4-202ENST00000420482 A6NJR5 290 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 B4GALT4O60513 344 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 CYP2C18P33260 490 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 GRM4Q14833 912 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 TMEM67Q5HYA8 995 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 SEPT14Q6ZU15 432 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 TBC1D5Q92609 795 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 COL25A1Q9BXS0 654 aaPredicted RBP24.77■■□□□ 1.56
PTPN4-202ENST00000420482 TRPV6Q9H1D0 765 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 ALDH8A1Q9H2A2 487 aaPredicted RBP24.77■■□□□ 1.56
PTPN4-202ENST00000420482 IL23AQ9NPF7 189 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 EYSQ5T1H1 3165 aa24.77■■□□□ 1.56
PTPN4-202ENST00000420482 EIF3JO75822 258 aaKnown RBP24.76■■□□□ 1.55
PTPN4-202ENST00000420482 GH1P01241 217 aa24.76■■□□□ 1.55
PTPN4-202ENST00000420482 CASC1Q6TDU7 716 aa24.76■■□□□ 1.55
PTPN4-202ENST00000420482 HOMER1Q86YM7 354 aa24.76■■□□□ 1.55
PTPN4-202ENST00000420482 RPUSD2Q8IZ73 545 aaKnown RBP24.76■■□□□ 1.55
PTPN4-202ENST00000420482 MTMR8Q96EF0 704 aa24.76■■□□□ 1.55
PTPN4-202ENST00000420482 RBM8AQ9Y5S9 174 aaKnown RBP24.76■■□□□ 1.55
PTPN4-202ENST00000420482 CDH23Q9H251 3354 aa24.76■■□□□ 1.55
PTPN4-202ENST00000420482 HSD17B4P51659 736 aa24.75■■□□□ 1.55
PTPN4-202ENST00000420482 PTPN11Q06124 597 aaPredicted RBP24.75■■□□□ 1.55
PTPN4-202ENST00000420482 FAM47CQ5HY64 1035 aa24.75■■□□□ 1.55
PTPN4-202ENST00000420482 TMEM240Q5SV17 173 aa24.75■■□□□ 1.55
PTPN4-202ENST00000420482 NFRKBQ6P4R8 1299 aa24.75■■□□□ 1.55
PTPN4-202ENST00000420482 COL20A1Q9P218 1284 aa24.75■■□□□ 1.55
PTPN4-202ENST00000420482 FGBP02675 491 aa24.74■■□□□ 1.55
PTPN4-202ENST00000420482 EIF2AK2P19525 551 aaKnown RBP24.74■■□□□ 1.55
PTPN4-202ENST00000420482 CCDC62Q6P9F0 684 aa24.74■■□□□ 1.55
PTPN4-202ENST00000420482 KCNV1Q6PIU1 500 aa24.74■■□□□ 1.55
PTPN4-202ENST00000420482 ZNF365Q70YC5 407 aa24.74■■□□□ 1.55
PTPN4-202ENST00000420482 MAFAQ8NHW3 353 aaPredicted RBP24.74■■□□□ 1.55
PTPN4-202ENST00000420482 COPS5Q92905 334 aa24.74■■□□□ 1.55
PTPN4-202ENST00000420482 MTA3Q9BTC8 594 aa24.74■■□□□ 1.55
PTPN4-202ENST00000420482 NOC4LQ9BVI4 516 aaKnown RBP24.74■■□□□ 1.55
PTPN4-202ENST00000420482 RIOX1Q9H6W3 641 aa24.74■■□□□ 1.55
PTPN4-202ENST00000420482 PXMP2Q9NR77 195 aa24.74■■□□□ 1.55
PTPN4-202ENST00000420482 NR3C2P08235 984 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 ACRP10323 421 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 KIF5BP33176 963 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 GHRHRQ02643 423 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 TROAPQ12815 778 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 NBPF20Q3BBV1 942 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 TMTC2Q8N394 836 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 CTCFLQ8NI51 663 aaPredicted RBP24.73■■□□□ 1.55
PTPN4-202ENST00000420482 MYLIPQ8WY64 445 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 NOD1Q9Y239 953 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 MRVI1Q9Y6F6 885 aa24.73■■□□□ 1.55
PTPN4-202ENST00000420482 PNMA6FA0A0J9YX94 578 aa24.72■■□□□ 1.55
PTPN4-202ENST00000420482 GCOM1H8Y6P7 765 aaPredicted RBP24.72■■□□□ 1.55
PTPN4-202ENST00000420482 ARIH2O95376 493 aa24.72■■□□□ 1.55
PTPN4-202ENST00000420482 POLR2MP0CAP2 368 aa24.72■■□□□ 1.55
PTPN4-202ENST00000420482 CASTP20810 708 aaKnown RBP24.72■■□□□ 1.55
PTPN4-202ENST00000420482 DNAJB2P25686 324 aa24.72■■□□□ 1.55
PTPN4-202ENST00000420482 CCL23P55773 120 aa24.72■■□□□ 1.55
PTPN4-202ENST00000420482 C16orf59Q7L2K0 433 aa24.72■■□□□ 1.55
PTPN4-202ENST00000420482 CHST3Q7LGC8 479 aa24.72■■□□□ 1.55
PTPN4-202ENST00000420482 PIGSQ96S52 555 aa24.72■■□□□ 1.55
PTPN4-202ENST00000420482 MAP3K14Q99558 947 aa24.72■■□□□ 1.55
PTPN4-202ENST00000420482 TRMT13Q9NUP7 481 aaKnown RBP24.72■■□□□ 1.55
PTPN4-202ENST00000420482 PFKMP08237 780 aa24.71■■□□□ 1.55
PTPN4-202ENST00000420482 MCM5P33992 734 aa24.71■■□□□ 1.55
PTPN4-202ENST00000420482 LY6KQ17RY6 165 aa24.71■■□□□ 1.55
PTPN4-202ENST00000420482 STOX1Q6ZVD7 989 aa24.71■■□□□ 1.55
PTPN4-202ENST00000420482 MB21D2Q8IYB1 491 aaPredicted RBP24.71■■□□□ 1.55
PTPN4-202ENST00000420482 HERVK_113Q902F9 699 aa24.71■■□□□ 1.55
PTPN4-202ENST00000420482 PRUNE2Q8WUY3 3088 aa24.71■■□□□ 1.55
PTPN4-202ENST00000420482 PPP1R11O60927 126 aaPredicted RBP24.7■■□□□ 1.54
PTPN4-202ENST00000420482 DDAH1O94760 285 aa24.7■■□□□ 1.54
PTPN4-202ENST00000420482 LAMC2Q13753 1193 aa24.7■■□□□ 1.54
PTPN4-202ENST00000420482 DGKDQ16760 1214 aa24.7■■□□□ 1.54
PTPN4-202ENST00000420482 RASIP1Q5U651 963 aa24.7■■□□□ 1.54
PTPN4-202ENST00000420482 NFXL1Q6ZNB6 911 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms