RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 BRDTQ58F21 947 aaPredicted RBP12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 TCEAL5Q5H9L2 206 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 MUM1L1Q5H9M0 696 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 FAM160B2Q86V87 743 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 ERC1Q8IUD2 1116 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 RNF135Q8IUD6 432 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 TMEM57Q8N5G2 664 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 PPP1R13LQ8WUF5 828 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 DHX38Q92620 1227 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 POP1Q99575 1024 aaKnown RBP12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 NOD1Q9Y239 953 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 INSL6Q9Y581 213 aa12.54□□□□□ -0.4
RAPGEF1-205ENST00000419442 CFAP54Q96N23 3096 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 H3BNC9 293 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 PLA2G6O60733 806 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 ALAS1P13196 640 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 ALDH5A1P51649 535 aaPredicted RBP12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 STAT2P52630 851 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 PTGISQ16647 500 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 CTC1Q2NKJ3 1217 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 SLFN13Q68D06 897 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 TRAF7Q6Q0C0 670 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 TRIM67Q6ZTA4 783 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 STAG1Q8WVM7 1258 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 CEP95Q96GE4 821 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 PURBQ96QR8 312 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 DNAJC2Q99543 621 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 NSUN3Q9H649 340 aaKnown RBP12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 C1orf115Q9H7X2 142 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 MTMR4Q9NYA4 1195 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 SLC4A4Q9Y6R1 1079 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 RAD50Q92878 1312 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 PLIN4Q96Q06 1357 aa12.53□□□□□ -0.4
RAPGEF1-205ENST00000419442 TRIOO75962 3097 aa12.52□□□□□ -0.4
RAPGEF1-205ENST00000419442 TMEM221A6NGB7 291 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 TMEM232C9JQI7 657 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 M0R296 226 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 MBTPS2O43462 519 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 NCK2O43639 380 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 IKBKEQ14164 716 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 EPC2Q52LR7 807 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 GDF6Q6KF10 455 aaPredicted RBP12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 RPAINQ86UA6 219 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 LRRC47Q8N1G4 583 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 CHURC1Q8WUH1 139 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 CLUAP1Q96AJ1 413 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 GMCL1Q96IK5 515 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 CRBNQ96SW2 442 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 MKNK2Q9HBH9 465 aa12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 ADD3Q9UEY8 706 aaKnown RBP12.52□□□□□ -0.41
RAPGEF1-205ENST00000419442 PROB1E7EW31 1015 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 TTLL1O95922 423 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 CHGBP05060 677 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 CKBP12277 381 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 GPM6BQ13491 265 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 FAM117BQ6P1L5 589 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 ERMP1Q7Z2K6 904 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 FBXL6Q8N531 539 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 PBXIP1Q96AQ6 731 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 IRF2BPLQ9H1B7 796 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 IL1RAPL2Q9NP60 686 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 PAG1Q9NWQ8 432 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 CLDND1Q9NY35 253 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 EXOC6BQ9Y2D4 811 aa12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 ZFHX2Q9C0A1 2572 aaPredicted RBP12.51□□□□□ -0.41
RAPGEF1-205ENST00000419442 PTPRZ1P23471 2315 aaPredicted RBP12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 EDNRBP24530 442 aa12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 SMAD4Q13485 552 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 MBTPS1Q14703 1052 aa12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 PPP2R5BQ15173 497 aa12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 TRIM71Q2Q1W2 868 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 GIMAP6Q6P9H5 292 aa12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 NSMFQ6X4W1 530 aa12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 SUGP1Q8IWZ8 645 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 RHPN1Q8TCX5 695 aa12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 SCFD2Q8WU76 684 aa12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 COPS5Q92905 334 aa12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 PUS7LQ9H0K6 701 aaKnown RBP12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 FAM86C1Q9NVL1 165 aa12.5□□□□□ -0.41
RAPGEF1-205ENST00000419442 FAM186AA6NE01 2351 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 KIAA1217Q5T5P2 1943 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 GSG1L2A8MUP6 293 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 LGR5O75473 907 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 DLX2Q07687 328 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 BAATQ14032 418 aaPredicted RBP12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 CEP85Q6P2H3 762 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 FBXO11Q86XK2 927 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 NEDD1Q8NHV4 660 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 KAT2BQ92831 832 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 STRBPQ96SI9 672 aaKnown RBP12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 GTF2IRD1Q9UHL9 959 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 PRR12Q9ULL5 1215 aa12.49□□□□□ -0.41
RAPGEF1-205ENST00000419442 STXBP3O00186 592 aa12.48□□□□□ -0.41
RAPGEF1-205ENST00000419442 AMHP03971 560 aa12.48□□□□□ -0.41
RAPGEF1-205ENST00000419442 ICAM1P05362 532 aa12.48□□□□□ -0.41
RAPGEF1-205ENST00000419442 SLC1A4P43007 532 aa12.48□□□□□ -0.41
RAPGEF1-205ENST00000419442 ZXDAP98168 799 aa12.48□□□□□ -0.41
RAPGEF1-205ENST00000419442 EP400NLQ6ZTU2 488 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms