RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 IL9P15248 144 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 ZNF76P36508 570 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 TLE2Q04725 743 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 PUM1Q14671 1186 aaKnown RBP eCLIP6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 DBN1Q16643 649 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 LEXMQ3ZCV2 418 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 EPHA10Q5JZY3 1008 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 TMEM240Q5SV17 173 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 TTC39BQ5VTQ0 682 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 FIGNL1Q6PIW4 674 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 GADL1Q6ZQY3 521 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 PRRT2Q7Z6L0 340 aaPredicted RBP6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 FAM89AQ96GI7 184 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 ZNF341Q9BYN7 854 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 NUCKS1Q9H1E3 243 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 TDRD3Q9H7E2 651 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 ALG13Q9NP73 1137 aaKnown RBP6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 ZFATQ9P243 1243 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 DCHS1Q96JQ0 3298 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 RLFQ13129 1914 aa6.81□□□□□ -1.32
ECHDC1-206ENST00000417628 DCDC2BA2VCK2 349 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 KHNYNO15037 678 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 BNIP3LO60238 219 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 MMP20O60882 483 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 HSP90AA1P07900 732 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 MAPTP10636 758 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 SLC5A1P13866 664 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 PPIGQ13427 754 aaKnown RBP eCLIP6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 CCINQ13939 588 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 NAALADL2Q58DX5 795 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 GJC2Q5T442 439 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 KRT40Q6A162 431 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 PSRC1Q6PGN9 363 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 NXPE4Q6UWF7 544 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 KRT25Q7Z3Z0 450 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 ANKRD18AQ8IVF6 992 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 PMEPA1Q969W9 287 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 MAP7D2Q96T17 732 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 BCO2Q9BYV7 579 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 UPF3BQ9BZI7 483 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 PDCL3Q9H2J4 239 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 MTIF3Q9H2K0 278 aaKnown RBP6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 UBE2ZQ9H832 354 aaPredicted RBP6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 LATS2Q9NRM7 1088 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 JAG2Q9Y219 1238 aa6.8□□□□□ -1.32
ECHDC1-206ENST00000417628 ZNF536O15090 1300 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 ZFHX2Q9C0A1 2572 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 PLXNB2O15031 1838 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 TMEM221A6NGB7 291 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 H0Y858 1186 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 M0R296 226 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 RFXAPO00287 272 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 IRS4O14654 1257 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 CES1P23141 567 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 NBL1P41271 181 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 CCT4P50991 539 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 LAMC2Q13753 1193 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 GRM2Q14416 872 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 NOL9Q5SY16 702 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 UTP14CQ5TAP6 766 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 MEI1Q5TIA1 1274 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 KIAA0319Q5VV43 1072 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 LRP10Q7Z4F1 713 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 MORC1Q86VD1 984 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 TXNRD3Q86VQ6 643 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 DHX37Q8IY37 1157 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 TRIM22Q8IYM9 498 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 CCDC155Q8N6L0 562 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 ARRDC4Q8NCT1 418 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 OR13H1Q8NG92 308 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 APBA2Q99767 749 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 THUMPD2Q9BTF0 503 aaKnown RBP6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 SUV39H2Q9H5I1 410 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 TLR9Q9NR96 1032 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 TMEM39AQ9NV64 488 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 KANSL3Q9P2N6 904 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 SALL4Q9UJQ4 1053 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 KMT2EQ8IZD2 1858 aa6.79□□□□□ -1.32
ECHDC1-206ENST00000417628 UTYO14607 1347 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 AK9Q5TCS8 1911 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 A0A1W2PP55 124 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 PQBP1O60828 265 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 GADD45BO75293 160 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 CLSTN1O94985 981 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 NEFMP07197 916 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 USP17L7P0C7H9 530 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 CNGA1P29973 690 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 RGS2P41220 211 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 GCLCP48506 637 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 FKBP1AP62942 108 aaKnown RBP6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 ZP2Q05996 745 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 CCL14Q16627 93 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 CCDC152Q4G0S7 254 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 HERC4Q5GLZ8 1057 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 PEAR1Q5VY43 1037 aaPredicted RBP6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 MCTP2Q6DN12 878 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 MCM10Q7L590 875 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 COPS6Q7L5N1 327 aa6.78□□□□□ -1.32
ECHDC1-206ENST00000417628 SMAP1Q8IYB5 467 aaPredicted RBP6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms