RNA–Protein interactions for RNA: ENST00000415683.2

GTF3C2-203, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-203ENST00000415683 TAF11Q15544 211 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 NFE2Q16621 373 aaPredicted RBP5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 HIF1AQ16665 826 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 DACT2Q5SW24 774 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 CST9Q5W186 159 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 VIRMAQ69YN4 1812 aaKnown RBP5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 KLHL10Q6JEL2 608 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 CCDC70Q6NSX1 233 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 PPP4R4Q6NUP7 873 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 DLK2Q6UY11 383 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 BCORQ6W2J9 1755 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 CCDC73Q6ZRK6 1079 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 SKAP1Q86WV1 359 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 MCF2L2Q86YR7 1114 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 TREML1Q86YW5 311 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 TRMT2AQ8IZ69 625 aaKnown RBP5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 RTL9Q8NET4 1388 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 ITPKCQ96DU7 683 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 CAPNS2Q96L46 248 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 KIF16BQ96L93 1317 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 SERINC2Q96SA4 455 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 GRIP2Q9C0E4 1043 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 SIL1Q9H173 461 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 C12orf49Q9H741 205 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 GBA2Q9HCG7 927 aaPredicted RBP5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 HOMER2Q9NSB8 354 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 GGA3Q9NZ52 723 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 VTI1BQ9UEU0 232 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 PGAP2Q9UHJ9 254 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 MED23Q9ULK4 1368 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 TMCC3Q9ULS5 477 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 RABGAP1Q9Y3P9 1069 aa5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 GPC6Q9Y625 555 aaPredicted RBP5.61□□□□□ -1.51
GTF3C2-203ENST00000415683 BRCA1P38398 1863 aaKnown RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 ANKRD31Q8N7Z5 1873 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 ARFGEF1Q9Y6D6 1849 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 WDR90Q96KV7 1748 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 RASSF10A6NK89 507 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 PRRT4C9JH25 899 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 IPO5O00410 1097 aaKnown RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 SLC26A4O43511 780 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 BCAR3O75815 825 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 SASH1O94885 1247 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 ALDH1A1P00352 501 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 EGFRP00533 1210 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 HNRNPCP07910 306 aaKnown RBP eCLIP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 SLC5A1P13866 664 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 PCSK2P16519 638 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 CTCFP49711 727 aaPredicted RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 ZNF157P51786 506 aaPredicted RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 ZNF132P52740 706 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 ZNF280AP59817 542 aaPredicted RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 EXOSC10Q01780 885 aaKnown RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 SLC20A2Q08357 652 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 SERINC3Q13530 473 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 PRKG1Q13976 671 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 SEPT2Q15019 361 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 GRAMD1BQ3KR37 738 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 LRRC24Q50LG9 513 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 PRAMEF18Q5VWM3 479 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 IER5Q5VY09 327 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 LCA5Q86VQ0 697 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 SNIP1Q8TAD8 396 aaKnown RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 KLHDC4Q8TBB5 520 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 RNF217Q8TC41 542 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 ARHGAP45Q92619 1136 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 C22orf23Q9BZE7 217 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 SLKQ9H2G2 1235 aaPredicted RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 PPCSQ9HAB8 311 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 VEZTQ9HBM0 779 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 ZDHHC3Q9NYG2 299 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 TMEM63CQ9P1W3 806 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 SCAF8Q9UPN6 1271 aaKnown RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 LRRFIP2Q9Y608 721 aaKnown RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 AK5Q9Y6K8 562 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 WASF2Q9Y6W5 498 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 NUP98P52948 1817 aa5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 COL11A2P13942 1736 aaPredicted RBP5.6□□□□□ -1.51
GTF3C2-203ENST00000415683 TNRC6CQ9HCJ0 1690 aaKnown RBP5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 SNED1Q8TER0 1413 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 CNTNAP1P78357 1384 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 UTYO14607 1347 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 ASTN2O75129 1339 aaPredicted RBP5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 FAM181BA6NEQ2 426 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 PRSS47A8MTI9 375 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 TGFBR3LH3BV60 316 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 J3QL48 77 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 EYA2O00167 538 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 MEN1O00255 615 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 PES1O00541 588 aaKnown RBP5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 EIF1AYO14602 144 aaKnown RBP5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 SRGAP3O43295 1099 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 AOC2O75106 756 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 PPFIA3O75145 1194 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 PDE8BO95263 885 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 ZIC2O95409 532 aaPredicted RBP5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 GNAI2P04899 355 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 CTSHP09668 335 aa5.59□□□□□ -1.51
GTF3C2-203ENST00000415683 NAT2P11245 290 aa5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms