RNA–Protein interactions for RNA: ENST00000415600.6

PTPRU-203, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 1,590 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-203ENST00000415600 SAMD3Q8N6K7 520 aa23.75■■□□□ 1.39
PTPRU-203ENST00000415600 RMDN3Q96TC7 470 aa23.75■■□□□ 1.39
PTPRU-203ENST00000415600 MTG1Q9BT17 334 aaPredicted RBP23.75■■□□□ 1.39
PTPRU-203ENST00000415600 MTIF3Q9H2K0 278 aaKnown RBP23.75■■□□□ 1.39
PTPRU-203ENST00000415600 HIPK3Q9H422 1215 aa23.75■■□□□ 1.39
PTPRU-203ENST00000415600 LCTP09848 1927 aa23.75■■□□□ 1.39
PTPRU-203ENST00000415600 STXBP2Q15833 593 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 ARHGEF16Q5VV41 709 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 CYB5R4Q7L1T6 521 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 CATIPQ7Z7H3 387 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 SLC17A8Q8NDX2 589 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 SYTL5Q8TDW5 730 aaPredicted RBP23.74■■□□□ 1.39
PTPRU-203ENST00000415600 PPP1R12CQ9BZL4 782 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 TMEM265A0A087WTH1 108 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 E7EWF7 191 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 ZBTB5O15062 677 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 MYL3P08590 195 aa23.74■■□□□ 1.39
PTPRU-203ENST00000415600 HSFX4A0A1B0GTS1 333 aaPredicted RBP23.73■■□□□ 1.39
PTPRU-203ENST00000415600 HSFX3A0A1B0GWH4 333 aaPredicted RBP23.73■■□□□ 1.39
PTPRU-203ENST00000415600 MAP4K1Q92918 833 aa23.73■■□□□ 1.39
PTPRU-203ENST00000415600 C22orf23Q9BZE7 217 aa23.73■■□□□ 1.39
PTPRU-203ENST00000415600 MAD2L2Q9UI95 211 aa23.73■■□□□ 1.39
PTPRU-203ENST00000415600 PCDHA1Q9Y5I3 950 aa23.73■■□□□ 1.39
PTPRU-203ENST00000415600 PALM3A6NDB9 673 aaPredicted RBP23.72■■□□□ 1.39
PTPRU-203ENST00000415600 CFBP00751 764 aa23.72■■□□□ 1.39
PTPRU-203ENST00000415600 EPHB4P54760 987 aa23.72■■□□□ 1.39
PTPRU-203ENST00000415600 PURAQ00577 322 aaKnown RBP23.72■■□□□ 1.39
PTPRU-203ENST00000415600 GRM4Q14833 912 aa23.72■■□□□ 1.39
PTPRU-203ENST00000415600 TMEM67Q5HYA8 995 aa23.72■■□□□ 1.39
PTPRU-203ENST00000415600 STAG2Q8N3U4 1231 aa23.72■■□□□ 1.39
PTPRU-203ENST00000415600 CSF2RAP15509 400 aa23.71■■□□□ 1.39
PTPRU-203ENST00000415600 PSMC6P62333 389 aa23.71■■□□□ 1.39
PTPRU-203ENST00000415600 TMEM63BQ5T3F8 832 aa23.71■■□□□ 1.39
PTPRU-203ENST00000415600 CASC1Q6TDU7 716 aa23.71■■□□□ 1.39
PTPRU-203ENST00000415600 TAAR1Q96RJ0 339 aa23.71■■□□□ 1.39
PTPRU-203ENST00000415600 MTA3Q9BTC8 594 aa23.71■■□□□ 1.39
PTPRU-203ENST00000415600 ALDH8A1Q9H2A2 487 aaPredicted RBP23.71■■□□□ 1.39
PTPRU-203ENST00000415600 A6NJR5 290 aa23.7■■□□□ 1.38
PTPRU-203ENST00000415600 EIF3JO75822 258 aaKnown RBP23.7■■□□□ 1.38
PTPRU-203ENST00000415600 GH1P01241 217 aa23.7■■□□□ 1.38
PTPRU-203ENST00000415600 SEPT14Q6ZU15 432 aa23.7■■□□□ 1.38
PTPRU-203ENST00000415600 RPUSD2Q8IZ73 545 aaKnown RBP23.7■■□□□ 1.38
PTPRU-203ENST00000415600 MTMR8Q96EF0 704 aa23.7■■□□□ 1.38
PTPRU-203ENST00000415600 MYH6P13533 1939 aa23.7■■□□□ 1.38
PTPRU-203ENST00000415600 PTGS1P23219 599 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 KIF5BP33176 963 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 CYP2C18P33260 490 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 FAM47CQ5HY64 1035 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 HOMER1Q86YM7 354 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 TMTC2Q8N394 836 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 FAM161BQ96MY7 647 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.69■■□□□ 1.38
PTPRU-203ENST00000415600 TRPV6Q9H1D0 765 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 IL23AQ9NPF7 189 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 RBM8AQ9Y5S9 174 aaKnown RBP23.69■■□□□ 1.38
PTPRU-203ENST00000415600 GRIN2DO15399 1336 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 B4GALT4O60513 344 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 PTPN11Q06124 597 aaPredicted RBP23.69■■□□□ 1.38
PTPRU-203ENST00000415600 NFRKBQ6P4R8 1299 aa23.69■■□□□ 1.38
PTPRU-203ENST00000415600 CTCFLQ8NI51 663 aaPredicted RBP23.69■■□□□ 1.38
PTPRU-203ENST00000415600 EIF2AK2P19525 551 aaKnown RBP23.68■■□□□ 1.38
PTPRU-203ENST00000415600 RBM25P49756 843 aaKnown RBP23.68■■□□□ 1.38
PTPRU-203ENST00000415600 HSD17B4P51659 736 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 GHRHRQ02643 423 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 TMEM240Q5SV17 173 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 KCNV1Q6PIU1 500 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 TBC1D5Q92609 795 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 MAP3K14Q99558 947 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 NOC4LQ9BVI4 516 aaKnown RBP23.68■■□□□ 1.38
PTPRU-203ENST00000415600 SEMA6BQ9H3T3 888 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 RIOX1Q9H6W3 641 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 PXMP2Q9NR77 195 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 NOD1Q9Y239 953 aa23.68■■□□□ 1.38
PTPRU-203ENST00000415600 PNMA6FA0A0J9YX94 578 aa23.67■■□□□ 1.38
PTPRU-203ENST00000415600 GCOM1H8Y6P7 765 aaPredicted RBP23.67■■□□□ 1.38
PTPRU-203ENST00000415600 NR3C2P08235 984 aa23.67■■□□□ 1.38
PTPRU-203ENST00000415600 POLR2MP0CAP2 368 aa23.67■■□□□ 1.38
PTPRU-203ENST00000415600 TROAPQ12815 778 aa23.67■■□□□ 1.38
PTPRU-203ENST00000415600 GUCD1Q96NT3 240 aa23.67■■□□□ 1.38
PTPRU-203ENST00000415600 LZTS2Q9BRK4 669 aa23.67■■□□□ 1.38
PTPRU-203ENST00000415600 COL20A1Q9P218 1284 aa23.67■■□□□ 1.38
PTPRU-203ENST00000415600 MRVI1Q9Y6F6 885 aa23.67■■□□□ 1.38
PTPRU-203ENST00000415600 DDAH1O94760 285 aa23.66■■□□□ 1.38
PTPRU-203ENST00000415600 FGBP02675 491 aa23.66■■□□□ 1.38
PTPRU-203ENST00000415600 CASTP20810 708 aaKnown RBP23.66■■□□□ 1.38
PTPRU-203ENST00000415600 MCM5P33992 734 aa23.66■■□□□ 1.38
PTPRU-203ENST00000415600 CCDC62Q6P9F0 684 aa23.66■■□□□ 1.38
PTPRU-203ENST00000415600 ZNF365Q70YC5 407 aa23.66■■□□□ 1.38
PTPRU-203ENST00000415600 PFKMP08237 780 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 GNAQP50148 359 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 NBPF20Q3BBV1 942 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 RNF20Q5VTR2 975 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 NFXL1Q6ZNB6 911 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 CHST3Q7LGC8 479 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 MB21D2Q8IYB1 491 aaPredicted RBP23.65■■□□□ 1.38
PTPRU-203ENST00000415600 COPS5Q92905 334 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 TMEM87BQ96K49 555 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 PIGSQ96S52 555 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 ACRP10323 421 aa23.65■■□□□ 1.38
PTPRU-203ENST00000415600 LAMC2Q13753 1193 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms