RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 LCP1P13796 627 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 TAL1P17542 331 aaPredicted RBP5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 NAT1P18440 290 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 ARL4AP40617 200 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 LSAMPQ13449 338 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 MCTP1Q6DN14 999 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 SDE2Q6IQ49 451 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 KCNT2Q6UVM3 1135 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 LBX2Q6XYB7 198 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 IRF2BP1Q8IU81 584 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 IFNL3Q8IZI9 196 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 LZTR1Q8N653 840 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 PLEKHO2Q8TD55 490 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 CDIP1Q9H305 208 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 TNFRSF12AQ9NP84 129 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 GULP1Q9UBP9 304 aa5.66□□□□□ -1.5
HMGB1P11-201ENST00000413899 ASXL2Q76L83 1435 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 ZNF503-AS2A6NEH8 195 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 H7BY64 318 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 SRGAP3O43295 1099 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 MSCO60682 206 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 GLI4P10075 376 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 CBX2Q14781 532 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 TCEA2Q15560 299 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 FNDC3BQ53EP0 1204 aaKnown RBP5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 PLEKHG4Q58EX7 1191 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 KIAA0907Q7Z7F0 614 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 NLRP10Q86W26 655 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 RIOX2Q8IUF8 465 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 FBLN5Q9UBX5 448 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 FBXL7Q9UJT9 491 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 PCDHA2Q9Y5H9 948 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 X6R8D5 127 aa5.65□□□□□ -1.5
HMGB1P11-201ENST00000413899 HRKO00198 91 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 ASMTLO95671 621 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 HSD3B2P26439 372 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 BCL6P41182 706 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 KIZQ2M2Z5 673 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 NETO2Q8NC67 525 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 SLC7A14Q8TBB6 771 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 TRIM39Q9HCM9 518 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 FAM53CQ9NYF3 392 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 SFMBT1Q9UHJ3 866 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 RWDD3Q9Y3V2 267 aa5.64□□□□□ -1.51
HMGB1P11-201ENST00000413899 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 C22orf46C9J442 243 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 ARVCFO00192 962 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 WNT9AO14904 365 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 PPP1R12AO14974 1030 aaPredicted RBP5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 FUCA1P04066 466 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 CYBBP04839 570 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 GALK1P51570 392 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 YBX1P67809 324 aaKnown RBP5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 PAQR3Q6TCH7 311 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 CEP68Q76N32 757 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 SIRT2Q8IXJ6 389 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 TMEM169Q96HH4 297 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 FEZ1Q99689 392 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 SLC52A2Q9HAB3 445 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 MARCH2Q9P0N8 246 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 TRAF6Q9Y4K3 522 aa5.63□□□□□ -1.51
HMGB1P11-201ENST00000413899 A0A1W2PQJ5 194 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 OR14I1A6ND48 311 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 ABLIM1O14639 778 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 RAPGEF3O95398 923 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 MPOP05164 745 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 DBHP09172 617 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 GRK2P25098 689 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 TACR1P25103 407 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 GRK3P35626 688 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 SLC6A11P48066 632 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 NR1I3Q14994 352 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 TKFCQ3LXA3 575 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 MROH9Q5TGP6 573 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 BICRALQ6AI39 1079 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 WWC2Q6AWC2 1192 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 CABP7Q86V35 215 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 TEX2Q8IWB9 1127 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 LIN37Q96GY3 246 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 CLUHP3Q96NS8 147 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 ZNF552Q9H707 407 aaPredicted RBP5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 CLDND1Q9NY35 253 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 NDOR1Q9UHB4 597 aa5.62□□□□□ -1.51
HMGB1P11-201ENST00000413899 FPR2P25090 351 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 TMEM62Q0P6H9 643 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 PABPC4Q13310 644 aaKnown RBP eCLIP5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 ADGRF1Q5T601 910 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 BRAPQ7Z569 592 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 PCDH19Q8TAB3 1148 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 USP33Q8TEY7 942 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 TRMT2BQ96GJ1 504 aaKnown RBP5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 SCLYQ96I15 445 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 ALG1Q9BT22 464 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 BTG4Q9NY30 223 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 KLHL14Q9P2G3 628 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 CADPSQ9ULU8 1353 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 PLAAQ9Y263 795 aa5.61□□□□□ -1.51
HMGB1P11-201ENST00000413899 TCRBV16S1A1N1A0A5B0 115 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms