RNA–Protein interactions for RNA: ENST00000413758.1

COL6A2-205, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 750 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-205ENST00000413758 CD4P01730 458 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 EIF2AK2P19525 551 aaKnown RBP19.53■□□□□ 0.72
COL6A2-205ENST00000413758 CYP2C18P33260 490 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 CHMP4BP1P59074 171 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 STXBP2Q15833 593 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 FAM47CQ5HY64 1035 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 FAM109BQ6ICB4 259 aaPredicted RBP19.53■□□□□ 0.72
COL6A2-205ENST00000413758 STOX1Q6ZVD7 989 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 SLC43A3Q8NBI5 491 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 MTG1Q9BT17 334 aaPredicted RBP19.53■□□□□ 0.72
COL6A2-205ENST00000413758 TRPV6Q9H1D0 765 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 HIPK3Q9H422 1215 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 SENP2Q9HC62 589 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 COL20A1Q9P218 1284 aa19.53■□□□□ 0.72
COL6A2-205ENST00000413758 GRIN2DO15399 1336 aa19.52■□□□□ 0.72
COL6A2-205ENST00000413758 CSF2RAP15509 400 aa19.52■□□□□ 0.72
COL6A2-205ENST00000413758 SMAD3P84022 425 aaKnown RBP19.52■□□□□ 0.72
COL6A2-205ENST00000413758 TRAF1Q13077 416 aa19.52■□□□□ 0.72
COL6A2-205ENST00000413758 CASC1Q6TDU7 716 aa19.52■□□□□ 0.72
COL6A2-205ENST00000413758 SLC17A8Q8NDX2 589 aa19.52■□□□□ 0.72
COL6A2-205ENST00000413758 PIBF1Q8WXW3 757 aa19.52■□□□□ 0.72
COL6A2-205ENST00000413758 PIGSQ96S52 555 aa19.52■□□□□ 0.72
COL6A2-205ENST00000413758 IWS1Q96ST2 819 aa19.52■□□□□ 0.72
COL6A2-205ENST00000413758 B4GALT4O60513 344 aa19.51■□□□□ 0.71
COL6A2-205ENST00000413758 KPNA6O60684 536 aa19.51■□□□□ 0.71
COL6A2-205ENST00000413758 ACRP10323 421 aa19.51■□□□□ 0.71
COL6A2-205ENST00000413758 PURAQ00577 322 aaKnown RBP19.51■□□□□ 0.71
COL6A2-205ENST00000413758 NFXL1Q6ZNB6 911 aa19.51■□□□□ 0.71
COL6A2-205ENST00000413758 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.51■□□□□ 0.71
COL6A2-205ENST00000413758 ANO2Q9NQ90 1003 aa19.51■□□□□ 0.71
COL6A2-205ENST00000413758 STXBP5LQ9Y2K9 1186 aa19.51■□□□□ 0.71
COL6A2-205ENST00000413758 PPP1R11O60927 126 aaPredicted RBP19.5■□□□□ 0.71
COL6A2-205ENST00000413758 GH1P01241 217 aa19.5■□□□□ 0.71
COL6A2-205ENST00000413758 MYCLP12524 364 aaPredicted RBP19.5■□□□□ 0.71
COL6A2-205ENST00000413758 HOXA13P31271 388 aaPredicted RBP19.5■□□□□ 0.71
COL6A2-205ENST00000413758 CCL23P55773 120 aa19.5■□□□□ 0.71
COL6A2-205ENST00000413758 ANTXR2P58335 489 aa19.5■□□□□ 0.71
COL6A2-205ENST00000413758 LY6KQ17RY6 165 aa19.5■□□□□ 0.71
COL6A2-205ENST00000413758 CENPQQ7L2Z9 268 aaPredicted RBP19.5■□□□□ 0.71
COL6A2-205ENST00000413758 MB21D2Q8IYB1 491 aaPredicted RBP19.5■□□□□ 0.71
COL6A2-205ENST00000413758 MTMR8Q96EF0 704 aa19.5■□□□□ 0.71
COL6A2-205ENST00000413758 ESYT1Q9BSJ8 1104 aa19.5■□□□□ 0.71
COL6A2-205ENST00000413758 ALDH8A1Q9H2A2 487 aaPredicted RBP19.5■□□□□ 0.71
COL6A2-205ENST00000413758 PXMP2Q9NR77 195 aa19.5■□□□□ 0.71
COL6A2-205ENST00000413758 PRC1O43663 620 aa19.49■□□□□ 0.71
COL6A2-205ENST00000413758 ARIH2O95376 493 aa19.49■□□□□ 0.71
COL6A2-205ENST00000413758 NR3C2P08235 984 aa19.49■□□□□ 0.71
COL6A2-205ENST00000413758 PSRC1Q6PGN9 363 aaPredicted RBP19.49■□□□□ 0.71
COL6A2-205ENST00000413758 CTCFLQ8NI51 663 aaPredicted RBP19.49■□□□□ 0.71
COL6A2-205ENST00000413758 PPP1R13LQ8WUF5 828 aa19.49■□□□□ 0.71
COL6A2-205ENST00000413758 LSG1Q9H089 658 aaKnown RBP19.49■□□□□ 0.71
COL6A2-205ENST00000413758 LAMA3Q16787 3333 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 PNMA6FA0A0J9YX94 578 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.48■□□□□ 0.71
COL6A2-205ENST00000413758 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.48■□□□□ 0.71
COL6A2-205ENST00000413758 CCDC69A6NI79 296 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 A6NJR5 290 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 GCOM1H8Y6P7 765 aaPredicted RBP19.48■□□□□ 0.71
COL6A2-205ENST00000413758 EIF3JO75822 258 aaKnown RBP19.48■□□□□ 0.71
COL6A2-205ENST00000413758 SUPT20HL2P0C7V6 817 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 POLR2MP0CAP2 368 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 MCM5P33992 734 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 HSD17B4P51659 736 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 TROAPQ12815 778 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 NBPF20Q3BBV1 942 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 TMEM240Q5SV17 173 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 ZNF365Q70YC5 407 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 FCHSD1Q86WN1 690 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 SKAP1Q86WV1 359 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 ZNF654Q8IZM8 581 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 IGDCC4Q8TDY8 1250 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 AFG1LQ8WV93 481 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 GUCD1Q96NT3 240 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 MYL10Q9BUA6 226 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 NOC4LQ9BVI4 516 aaKnown RBP19.48■□□□□ 0.71
COL6A2-205ENST00000413758 RIOX1Q9H6W3 641 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 IL23AQ9NPF7 189 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 TRMT13Q9NUP7 481 aaKnown RBP19.48■□□□□ 0.71
COL6A2-205ENST00000413758 MRVI1Q9Y6F6 885 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 UMODL1Q5DID0 1318 aa19.48■□□□□ 0.71
COL6A2-205ENST00000413758 OPLAHO14841 1288 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 SLC27A2O14975 620 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 CYP2C9P11712 490 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 KIF5BP33176 963 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 SLC35G1Q2M3R5 365 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 CCDC62Q6P9F0 684 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 C16orf59Q7L2K0 433 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 SEMA6BQ9H3T3 888 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 LY9Q9HBG7 655 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 MAP3K20Q9NYL2 800 aaKnown RBP19.47■□□□□ 0.71
COL6A2-205ENST00000413758 NOD1Q9Y239 953 aa19.47■□□□□ 0.71
COL6A2-205ENST00000413758 CYTH3O43739 400 aa19.46■□□□□ 0.71
COL6A2-205ENST00000413758 DDAH1O94760 285 aa19.46■□□□□ 0.71
COL6A2-205ENST00000413758 FGBP02675 491 aa19.46■□□□□ 0.71
COL6A2-205ENST00000413758 CREB3L3Q68CJ9 461 aa19.46■□□□□ 0.71
COL6A2-205ENST00000413758 SAMD3Q8N6K7 520 aa19.46■□□□□ 0.71
COL6A2-205ENST00000413758 RRP36Q96EU6 259 aaKnown RBP19.46■□□□□ 0.71
COL6A2-205ENST00000413758 MTIF3Q9H2K0 278 aaKnown RBP19.46■□□□□ 0.71
COL6A2-205ENST00000413758 BAZ2BQ9UIF8 2168 aaKnown RBP19.46■□□□□ 0.71
COL6A2-205ENST00000413758 CASTP20810 708 aaKnown RBP19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms