RNA–Protein interactions for RNA: ENST00000413473.6

TTC39A-208, Transcript of tetratricopeptide repeat domain 39A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TTC39A, Length 2,718 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39A-208ENST00000413473 ZMYND10O75800 440 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 VWA3BQ502W6 1294 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 MUM1L1Q5H9M0 696 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 FAM182BQ5T319 152 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 SECISBP2LQ93073 1101 aaKnown RBP16.67■□□□□ 0.26
TTC39A-208ENST00000413473 RPGRIP1Q96KN7 1286 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 RIOX1Q9H6W3 641 aa16.67■□□□□ 0.26
TTC39A-208ENST00000413473 TNRC6CQ9HCJ0 1690 aaKnown RBP16.66■□□□□ 0.26
TTC39A-208ENST00000413473 SBF2Q86WG5 1849 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 MYH10P35580 1976 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 ANO9A1A5B4 782 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 SLC37A4O43826 429 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 UFL1O94874 794 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 RHBDL3P58872 404 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 CCDC96Q2M329 555 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 UNC13DQ70J99 1090 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 CNBD1Q8NA66 436 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 SMCR8Q8TEV9 937 aaPredicted RBP16.66■□□□□ 0.26
TTC39A-208ENST00000413473 LARP4BQ92615 738 aaKnown RBP16.66■□□□□ 0.26
TTC39A-208ENST00000413473 CDK5RAP3Q96JB5 506 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 ARHGAP20Q9P2F6 1191 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 ESYT2A0FGR8 921 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 EDIL3O43854 480 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 TDP2O95551 362 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 ORC2Q13416 577 aaPredicted RBP16.66■□□□□ 0.26
TTC39A-208ENST00000413473 C15orf52Q6ZUT6 534 aaKnown RBP16.66■□□□□ 0.26
TTC39A-208ENST00000413473 CERS3Q8IU89 383 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 FAM71BQ8TC56 605 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 ACBD3Q9H3P7 528 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 MMRN2Q9H8L6 949 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 SIK3Q9Y2K2 1263 aa16.66■□□□□ 0.26
TTC39A-208ENST00000413473 PVALEFA0A1B0GWK0 134 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 POTEMA6NI47 508 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 PDHBP11177 359 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 ERCC3P19447 782 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 MCM3P25205 808 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 TNNT3P45378 269 aaPredicted RBP16.65■□□□□ 0.26
TTC39A-208ENST00000413473 FXR2P51116 673 aaKnown RBP eCLIP16.65■□□□□ 0.26
TTC39A-208ENST00000413473 MFSD14BQ5SR56 506 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 TRAPPC3LQ5T215 181 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 NUDT12Q9BQG2 462 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 STK17AQ9UEE5 414 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 TARSL2A2RTX5 802 aaKnown RBP16.65■□□□□ 0.26
TTC39A-208ENST00000413473 PLCG2P16885 1265 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 CAPN2P17655 700 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 HNRNPH3P31942 346 aaKnown RBP16.65■□□□□ 0.26
TTC39A-208ENST00000413473 ACTN2P35609 894 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 GPIHBP1Q8IV16 184 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 GDAP1L1Q96MZ0 367 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 IFIH1Q9BYX4 1025 aaKnown RBP16.65■□□□□ 0.26
TTC39A-208ENST00000413473 PCDHA13Q9Y5I0 950 aa16.65■□□□□ 0.26
TTC39A-208ENST00000413473 CDK5RAP2Q96SN8 1893 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 TMEM266Q2M3C6 531 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 GUF1Q8N442 669 aaKnown RBP16.64■□□□□ 0.25
TTC39A-208ENST00000413473 GOLGA5Q8TBA6 731 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 TSGA10Q9BZW7 698 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 DDX60LQ5H9U9 1706 aaKnown RBP16.64■□□□□ 0.25
TTC39A-208ENST00000413473 USO1O60763 962 aaKnown RBP16.64■□□□□ 0.25
TTC39A-208ENST00000413473 EIF4A3P38919 411 aaKnown RBP16.64■□□□□ 0.25
TTC39A-208ENST00000413473 NOVP48745 357 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 ADCY7P51828 1080 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 MAN2A1Q16706 1144 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 MAP9Q49MG5 647 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 LRRC47Q8N1G4 583 aaKnown RBP16.64■□□□□ 0.25
TTC39A-208ENST00000413473 RPGRQ92834 1020 aaKnown RBP16.64■□□□□ 0.25
TTC39A-208ENST00000413473 IQCDQ96DY2 449 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 VIPAS39Q9H9C1 493 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 MED4Q9NPJ6 270 aa16.64■□□□□ 0.25
TTC39A-208ENST00000413473 IL1R1P14778 569 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 KIF11P52732 1056 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 EIF6P56537 245 aaKnown RBP16.63■□□□□ 0.25
TTC39A-208ENST00000413473 RAD51AP2Q09MP3 1159 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 LRRC41Q15345 812 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 RRAGAQ7L523 313 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 KCNK18Q7Z418 384 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 TRIM58Q8NG06 486 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 SNX29Q8TEQ0 813 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 RAD54LQ92698 747 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 DEF6Q9H4E7 631 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 MLXIPQ9HAP2 919 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 JRKLQ9Y4A0 524 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 CAPN6Q9Y6Q1 641 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 ATP2B2Q01814 1243 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 C2orf54Q08AI8 447 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 PDIA5Q14554 519 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 KRT79Q5XKE5 535 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 CCDC84Q86UT8 332 aaPredicted RBP16.63■□□□□ 0.25
TTC39A-208ENST00000413473 GLIS3Q8NEA6 775 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 DDX12PQ92771 950 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 FAM163AQ96GL9 167 aaPredicted RBP16.63■□□□□ 0.25
TTC39A-208ENST00000413473 DRC1Q96MC2 740 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 HINFPQ9BQA5 517 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 RAB34Q9BZG1 259 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 GPCPD1Q9NPB8 672 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 MTMR4Q9NYA4 1195 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 GGA1Q9UJY5 639 aa16.63■□□□□ 0.25
TTC39A-208ENST00000413473 TULP2O00295 520 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 AKR1B10O60218 316 aa16.62■□□□□ 0.25
TTC39A-208ENST00000413473 TACC1O75410 805 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms