RNA–Protein interactions for RNA: ENST00000412328.5

HSPG2-204, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-204ENST00000412328 CMTR1Q8N1G2 835 aaKnown RBP20.16■□□□□ 0.82
HSPG2-204ENST00000412328 AGXT2Q9BYV1 514 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 PXMP2Q9NR77 195 aa20.16■□□□□ 0.82
HSPG2-204ENST00000412328 REC8O95072 547 aa20.15■□□□□ 0.82
HSPG2-204ENST00000412328 CFBP00751 764 aa20.15■□□□□ 0.82
HSPG2-204ENST00000412328 MAGEA10P43363 369 aaPredicted RBP20.15■□□□□ 0.82
HSPG2-204ENST00000412328 PDE4DQ08499 809 aa20.15■□□□□ 0.82
HSPG2-204ENST00000412328 FBXL16Q8N461 479 aa20.15■□□□□ 0.82
HSPG2-204ENST00000412328 SAMD3Q8N6K7 520 aa20.15■□□□□ 0.82
HSPG2-204ENST00000412328 IL31RAQ8NI17 732 aa20.15■□□□□ 0.82
HSPG2-204ENST00000412328 FAM217BQ9NTX9 383 aaPredicted RBP20.15■□□□□ 0.82
HSPG2-204ENST00000412328 MAP3K20Q9NYL2 800 aaKnown RBP20.15■□□□□ 0.82
HSPG2-204ENST00000412328 SLC12A7Q9Y666 1083 aa20.15■□□□□ 0.82
HSPG2-204ENST00000412328 LAMA2P24043 3122 aaKnown RBP20.15■□□□□ 0.82
HSPG2-204ENST00000412328 ELP1O95163 1332 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 RGS20O76081 388 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 HOXA13P31271 388 aaPredicted RBP20.14■□□□□ 0.81
HSPG2-204ENST00000412328 BMP8BP34820 402 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 CCDC62Q6P9F0 684 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 ANKRD33Q7Z3H0 272 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 FANCBQ8NB91 859 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 PCSK9Q8NBP7 692 aaKnown RBP20.14■□□□□ 0.81
HSPG2-204ENST00000412328 NSUN6Q8TEA1 469 aaKnown RBP20.14■□□□□ 0.81
HSPG2-204ENST00000412328 RMDN3Q96TC7 470 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 LZTS2Q9BRK4 669 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 PDCD2LQ9BRP1 358 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 WDR11Q9BZH6 1224 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 STARD7Q9NQZ5 370 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 ATP11BQ9Y2G3 1177 aa20.14■□□□□ 0.81
HSPG2-204ENST00000412328 HMGB1P09429 215 aaKnown RBP20.13■□□□□ 0.81
HSPG2-204ENST00000412328 EIF2AK2P19525 551 aaKnown RBP20.13■□□□□ 0.81
HSPG2-204ENST00000412328 GNAQP50148 359 aa20.13■□□□□ 0.81
HSPG2-204ENST00000412328 CDK7P50613 346 aa20.13■□□□□ 0.81
HSPG2-204ENST00000412328 FXR1P51114 621 aaKnown RBP eCLIP20.13■□□□□ 0.81
HSPG2-204ENST00000412328 RCAN1P53805 252 aa20.13■□□□□ 0.81
HSPG2-204ENST00000412328 FSCN1Q16658 493 aaKnown RBP20.13■□□□□ 0.81
HSPG2-204ENST00000412328 SH3RF1Q7Z6J0 888 aa20.13■□□□□ 0.81
HSPG2-204ENST00000412328 SLC43A3Q8NBI5 491 aa20.13■□□□□ 0.81
HSPG2-204ENST00000412328 JAKMIP1Q96N16 626 aaKnown RBP20.13■□□□□ 0.81
HSPG2-204ENST00000412328 IWS1Q96ST2 819 aa20.13■□□□□ 0.81
HSPG2-204ENST00000412328 USP26Q9BXU7 913 aa20.13■□□□□ 0.81
HSPG2-204ENST00000412328 SCN5AQ14524 2016 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 GRIN2DO15399 1336 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 A0A1W2PPC1 479 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 TRIM43BA6NCK2 446 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 TLE2Q04725 743 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 PGM5Q15124 567 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 GNASQ5JWF2 1037 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 SCFD2Q8WU76 684 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 PIBF1Q8WXW3 757 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 COPS5Q92905 334 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 TRIM43Q96BQ3 446 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-204ENST00000412328 RRP36Q96EU6 259 aaKnown RBP20.12■□□□□ 0.81
HSPG2-204ENST00000412328 TRIP12Q14669 1992 aaPredicted RBP20.12■□□□□ 0.81
HSPG2-204ENST00000412328 WDR81Q562E7 1941 aa20.12■□□□□ 0.81
HSPG2-204ENST00000412328 MEIS2O14770 477 aa20.11■□□□□ 0.81
HSPG2-204ENST00000412328 DYNC1LI2O43237 492 aaPredicted RBP20.11■□□□□ 0.81
HSPG2-204ENST00000412328 NR3C2P08235 984 aa20.11■□□□□ 0.81
HSPG2-204ENST00000412328 RPS6KB1P23443 525 aa20.11■□□□□ 0.81
HSPG2-204ENST00000412328 ITGB8P26012 769 aa20.11■□□□□ 0.81
HSPG2-204ENST00000412328 CDC27P30260 824 aa20.11■□□□□ 0.81
HSPG2-204ENST00000412328 TRAF1Q13077 416 aa20.11■□□□□ 0.81
HSPG2-204ENST00000412328 PPP2R5BQ15173 497 aa20.11■□□□□ 0.81
HSPG2-204ENST00000412328 MPHOSPH6Q99547 160 aaKnown RBP20.11■□□□□ 0.81
HSPG2-204ENST00000412328 SPC25Q9HBM1 224 aa20.11■□□□□ 0.81
HSPG2-204ENST00000412328 GBF1Q92538 1859 aa20.11■□□□□ 0.81
HSPG2-204ENST00000412328 KLF18A0A0U1RQI7 1052 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 hCG_1642624A0A1W2PR95 340 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 PIK3CDO00329 1044 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 NKRFO15226 690 aaKnown RBP eCLIP20.1■□□□□ 0.81
HSPG2-204ENST00000412328 ZBTB43O43298 467 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 SLC34A2O95436 690 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 ARHGAP1Q07960 439 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 TYW1BQ6NUM6 668 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 CXCL17Q6UXB2 119 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 FAM126BQ8IXS8 530 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 GLT1D1Q96MS3 346 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 TOX2Q96NM4 488 aa20.1■□□□□ 0.81
HSPG2-204ENST00000412328 RBM28Q9NW13 759 aaKnown RBP20.1■□□□□ 0.81
HSPG2-204ENST00000412328 A0A0U1RQG5 324 aaPredicted RBP20.09■□□□□ 0.81
HSPG2-204ENST00000412328 A6NJR5 290 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 GCOM1H8Y6P7 765 aaPredicted RBP20.09■□□□□ 0.81
HSPG2-204ENST00000412328 CLTBP09497 229 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 POLR2MP0CAP2 368 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 EVCP57679 992 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 PURAQ00577 322 aaKnown RBP20.09■□□□□ 0.81
HSPG2-204ENST00000412328 FAAP100Q0VG06 881 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 STXBP2Q15833 593 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 RTN1Q16799 776 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 ARHGEF16Q5VV41 709 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 BLOC1S2Q6QNY1 142 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 Q6ZUG5 572 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 AP5M1Q9H0R1 490 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 TBX21Q9UL17 535 aa20.09■□□□□ 0.81
HSPG2-204ENST00000412328 B4DLN1 442 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 KIAA0355O15063 1070 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 PQBP1O60828 265 aaKnown RBP20.08■□□□□ 0.81
HSPG2-204ENST00000412328 CD4P01730 458 aa20.08■□□□□ 0.81
HSPG2-204ENST00000412328 TXNP10599 105 aaKnown RBP20.08■□□□□ 0.81
HSPG2-204ENST00000412328 MRPL12P52815 198 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms