RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 CACTINQ8WUQ7 758 aaKnown RBP27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 NLRP7Q8WX94 980 aa27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 MAN1A1P33908 653 aa27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 NT5C2P49902 561 aa27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 USP17L2Q6R6M4 530 aa27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 PSAPP07602 524 aa27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 OSBP2Q969R2 916 aa27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 SH2B2O14492 632 aaPredicted RBP27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 TMEM179Q6ZVK1 233 aa27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 PALM2Q8IXS6 379 aa27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 PIH1D3Q9NQM4 214 aaKnown RBP27.42■■□□□ 1.98
SPIRE1-202ENST00000409402 CHD1O14646 1710 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 ZNF341Q9BYN7 854 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 CYP27B1O15528 508 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 ASNSP08243 561 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 ABCC12Q96J65 1359 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 RPAP1Q9BWH6 1393 aaPredicted RBP27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 PSMC2P35998 433 aaKnown RBP27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 CUL4BQ13620 913 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 SPDYE16A6NNV3 312 aaPredicted RBP27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 SLC39A14Q15043 492 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 SPDYE2Q495Y8 402 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 PCDHB4Q9Y5E5 795 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 HLFQ16534 295 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 EEPD1Q7L9B9 569 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 SNX25Q9H3E2 840 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 SAR1BQ9Y6B6 198 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 OVOS2A0A0G2JMS6 1433 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 OVOS2A0A0J9YW53 1432 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 OVOS2Q6IE36 1432 aa27.41■■□□□ 1.98
SPIRE1-202ENST00000409402 A0A1W2PQ27 194 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 A0A1W2PQ64 194 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 A0A1W2PQD8 194 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 PPP2R5EQ16537 467 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 SLC27A3Q5K4L6 730 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 SEPT10Q9P0V9 454 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 PSDA5PKW4 1024 aaPredicted RBP27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 NME8Q8N427 588 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 GADD45GIP1Q8TAE8 222 aaPredicted RBP27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 COL15A1P39059 1388 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 KCNK3O14649 394 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 STMN2Q93045 179 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 TMEM206Q9H813 350 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 RPGRIP1Q96KN7 1286 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 GSDMAQ96QA5 445 aa27.4■■□□□ 1.98
SPIRE1-202ENST00000409402 TYW5A2RUC4 315 aaKnown RBP27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 PFDN6O15212 129 aa27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 DENND2CQ68D51 928 aa27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 CTAGE3PQ8IX95 158 aa27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 KRT12Q99456 494 aa27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 A6NJR5 290 aa27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 H2AFZP0C0S5 128 aa27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 CRKP46108 304 aa27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 H2AFVQ71UI9 128 aa27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 RASEFQ8IZ41 740 aa27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 PRPF3O43395 683 aaKnown RBP27.39■■□□□ 1.98
SPIRE1-202ENST00000409402 PNMA6FA0A0J9YX94 578 aa27.39■■□□□ 1.97
SPIRE1-202ENST00000409402 NR2F2P24468 414 aa27.39■■□□□ 1.97
SPIRE1-202ENST00000409402 PPIL4Q8WUA2 492 aaKnown RBP eCLIP27.39■■□□□ 1.97
SPIRE1-202ENST00000409402 ARHGEF37A1IGU5 675 aa27.39■■□□□ 1.97
SPIRE1-202ENST00000409402 ARHGAP31Q2M1Z3 1444 aa27.39■■□□□ 1.97
SPIRE1-202ENST00000409402 CNOT6LQ96LI5 555 aaKnown RBP27.39■■□□□ 1.97
SPIRE1-202ENST00000409402 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.39■■□□□ 1.97
SPIRE1-202ENST00000409402 SYNJ2BP-COX16A0A087WUM0 186 aa27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 COX16Q9P0S2 106 aa27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 RINT1Q6NUQ1 792 aa27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 MICALL1Q8N3F8 863 aa27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 STK17AQ9UEE5 414 aa27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 HYOU1Q9Y4L1 999 aa27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 RIOK3O14730 519 aaKnown RBP27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 PHBP35232 272 aa27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 NSUN7Q8NE18 718 aaKnown RBP27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 CFAP57Q96MR6 1250 aa27.38■■□□□ 1.97
SPIRE1-202ENST00000409402 PLCB4Q15147 1175 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 KIAA1841Q6NSI8 718 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 MAP7D3Q8IWC1 876 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 FANCLQ9NW38 375 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 TMEM63CQ9P1W3 806 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 CYP2D7A0A087X1C5 515 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 KRIT1O00522 736 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 ZWINTO95229 277 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 MMP1P03956 469 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 ADCY8P40145 1251 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 MTERF2Q49AM1 385 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 A6NNZ2 444 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 TUBB8Q3ZCM7 444 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 TMED8Q6PL24 325 aaPredicted RBP27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 RSRC2Q7L4I2 434 aaKnown RBP27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 FAM81BQ96LP2 452 aa27.37■■□□□ 1.97
SPIRE1-202ENST00000409402 CCDC160A6NGH7 325 aa27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 TRMT2AQ8IZ69 625 aaKnown RBP27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 PI4K2BQ8TCG2 481 aa27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 DHTKD1Q96HY7 919 aaPredicted RBP27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 ZSWIM5Q9P217 1185 aa27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 SDCCAG8Q86SQ7 713 aaPredicted RBP27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 BRIP1Q9BX63 1249 aa27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 ECE2O60344 883 aa27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 BZW2Q9Y6E2 419 aaKnown RBP27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 FAM186BQ8IYM0 893 aa27.36■■□□□ 1.97
SPIRE1-202ENST00000409402 CACYBPQ9HB71 228 aaKnown RBP27.36■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 158.9 ms