RNA–Protein interactions for RNA: ENST00000405995.5

PRRC2B-203, Transcript of proline rich coiled-coil 2B, humanhuman

TSL 5 BASIC

Gene PRRC2B, Length 9,157 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRRC2B-203ENST00000405995 TMEM154Q6P9G4 183 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 SMCR8Q8TEV9 937 aaPredicted RBP11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 ASZ1Q8WWH4 475 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 TRIM56Q9BRZ2 755 aaKnown RBP11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 IFT140Q96RY7 1462 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 DNALI1O14645 258 aaPredicted RBP11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 GET4Q7L5D6 327 aaPredicted RBP11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 KRT12Q99456 494 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 SYTL2Q9HCH5 934 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 MRGBPQ9NV56 204 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 PARVAQ9NVD7 372 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 CCDC87Q9NVE4 849 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 HPS5Q9UPZ3 1129 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 ALDH1L1O75891 902 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 EYA3Q99504 573 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 TROQ12816 1431 aaPredicted RBP11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 KPNA4O00629 521 aaPredicted RBP11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 DAPK3O43293 454 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 NOP9Q86U38 636 aaKnown RBP11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 IQUBQ8NA54 791 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 ZKSCAN3Q9BRR0 538 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 MCM8Q9UJA3 840 aa11.11□□□□□ -0.63
PRRC2B-203ENST00000405995 SLFN5Q08AF3 891 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 EGFL6Q8IUX8 553 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 ANKRD42Q8N9B4 389 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 DDI1Q8WTU0 396 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 ALG1Q9BT22 464 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 SETD1BQ9UPS6 1966 aaKnown RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 ACTN3Q08043 901 aaPredicted RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 PLEKHA4Q9H4M7 779 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 IFT122Q9HBG6 1241 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 HSPA13P48723 471 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 ETF1P62495 437 aaKnown RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 RCN2Q14257 317 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 NCAPH2Q6IBW4 605 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 PLD3Q8IV08 490 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 LARP6Q9BRS8 491 aaKnown RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 PDCD10Q9BUL8 212 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 RHOBTB2Q9BYZ6 727 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.1□□□□□ -0.633e-9■□□□□ 11.2
PRRC2B-203ENST00000405995 NVLO15381 856 aaKnown RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 MSR1P21757 451 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 VPS37AQ8NEZ2 397 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 SUN5Q8TC36 379 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 BRF1Q92994 677 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 NUDT16Q96DE0 195 aaKnown RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 IPO11Q9UI26 975 aaKnown RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 PNMA2Q9UL42 364 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 NXNQ6DKJ4 435 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 TBC1D9Q6ZT07 1266 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 GNAT1P11488 350 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 GARSP41250 739 aaKnown RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 CCT2P78371 535 aaKnown RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 EMBQ6PCB8 327 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 CCT7Q99832 543 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 EURLQ9NYK6 297 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 RABL2AQ9UBK7 228 aaPredicted RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 SEL1LQ9UBV2 794 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 UBE4BO95155 1302 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 POTEFA5A3E0 1075 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 F8W8V4 182 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 BAIAP3O94812 1187 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 DLGAP3O95886 979 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 SERPINB8P50452 374 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 ATP13A5Q4VNC0 1218 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 THOC7Q6I9Y2 204 aaKnown RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 SDE2Q6IQ49 451 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 CC2D1AQ6P1N0 951 aaPredicted RBP11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 SETDB2Q96T68 719 aa11.1□□□□□ -0.63
PRRC2B-203ENST00000405995 HNRNPRO43390 633 aaKnown RBP11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 SLC12A2P55011 1212 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 GABPAQ06546 454 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 RPS6KA1Q15418 735 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 LSM14BQ9BX40 385 aaKnown RBP11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 SNRPA1P09661 255 aaKnown RBP11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 PUDPQ08623 228 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 KRT81Q14533 505 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 TRIM74Q86UV6 250 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 TRIM73Q86UV7 250 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 LRRC8AQ8IWT6 810 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 PEX5LQ8IYB4 626 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 RABGEF1Q9UJ41 708 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 SYNRGQ9UMZ2 1314 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 ESRRAP11474 423 aaPredicted RBP11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 LRRC37BQ96QE4 947 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 VPS16Q9H269 839 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 TCP1P17987 556 aaKnown RBP11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 IL12RB1P42701 662 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 HAND2P61296 217 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 PLS1Q14651 629 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 TBC1D1Q86TI0 1168 aaPredicted RBP11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 BCRP11274 1271 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 PTGS2P35354 604 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 CORO7P57737 925 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 C17orf53Q8N3J3 647 aaPredicted RBP11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 STKLD1Q8NE28 680 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 NAF1Q96HR8 494 aaKnown RBP11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 FAM96AQ9H5X1 160 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 AP1S2P56377 157 aa11.09□□□□□ -0.63
PRRC2B-203ENST00000405995 MED21Q13503 144 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms