RNA–Protein interactions for RNA: ENST00000403537.3

THUMPD2-202, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 961 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-202ENST00000403537 CCSAPQ6IQ19 270 aaPredicted RBP20.7■□□□□ 0.9
THUMPD2-202ENST00000403537 SRBD1Q8N5C6 995 aaKnown RBP20.7■□□□□ 0.9
THUMPD2-202ENST00000403537 FANCBQ8NB91 859 aa20.7■□□□□ 0.9
THUMPD2-202ENST00000403537 TOX2Q96NM4 488 aa20.7■□□□□ 0.9
THUMPD2-202ENST00000403537 AMNQ9BXJ7 453 aa20.7■□□□□ 0.9
THUMPD2-202ENST00000403537 SEZ6LQ9BYH1 1024 aa20.7■□□□□ 0.9
THUMPD2-202ENST00000403537 JMJD4Q9H9V9 463 aa20.7■□□□□ 0.9
THUMPD2-202ENST00000403537 ASTN1O14525 1302 aa20.7■□□□□ 0.9
THUMPD2-202ENST00000403537 DCDC2CA8MYV0 355 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 LARGE1O95461 756 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 CALM1P0DP23 149 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 CALM2P0DP24 149 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 CALM3P0DP25 149 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 PDIA3P30101 505 aaKnown RBP20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 EVCP57679 992 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 RTN1Q16799 776 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 SLC30A10Q6XR72 485 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 SYNE3Q6ZMZ3 975 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 TMTC3Q6ZXV5 915 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 TLK2Q86UE8 772 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 SAMD3Q8N6K7 520 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 PIBF1Q8WXW3 757 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 MAP3K14Q99558 947 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 NCOA5Q9HCD5 579 aaKnown RBP20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 TPCN1Q9ULQ1 816 aa20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 GNEQ9Y223 722 aaKnown RBP20.69■□□□□ 0.9
THUMPD2-202ENST00000403537 ZBTB5O15062 677 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 PPP1R11O60927 126 aaPredicted RBP20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 DTNBO60941 627 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 ASGR1P07306 291 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 KIF5BP33176 963 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 METAP2P50579 478 aaKnown RBP eCLIP20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 CCT2P78371 535 aaKnown RBP20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 TLE2Q04725 743 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 STK3Q13188 491 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 TAPT1Q6NXT6 567 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 ANKRD33Q7Z3H0 272 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 FBXO16Q8IX29 292 aaPredicted RBP20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 TDHQ8IZJ6 230 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 CCDC82Q8N4S0 544 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 PRDM5Q9NQX1 630 aaPredicted RBP20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 MAP3K20Q9NYL2 800 aaKnown RBP20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 NID2Q14112 1375 aa20.68■□□□□ 0.9
THUMPD2-202ENST00000403537 A0A0U1RQG5 324 aaPredicted RBP20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 hCG_1642624A0A1W2PR95 340 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 RBM47A0AV96 593 aaKnown RBP20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 NKRFO15226 690 aaKnown RBP eCLIP20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 ADCY6O43306 1168 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 PPFIA3O75145 1194 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 CLTBP09497 229 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 EDNRBP24530 442 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 ADD1P35611 737 aaKnown RBP20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 FSCN1Q16658 493 aaKnown RBP20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 DUSP28Q4G0W2 176 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 BRDTQ58F21 947 aaPredicted RBP20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 EEPD1Q7L9B9 569 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 HOMER1Q86YM7 354 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 NSUN6Q8TEA1 469 aaKnown RBP20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 VTI1AQ96AJ9 217 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 MTMR8Q96EF0 704 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 PIGSQ96S52 555 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 ALDH8A1Q9H2A2 487 aaPredicted RBP20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 RIOX1Q9H6W3 641 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 PDLIM7Q9NR12 457 aa20.67■□□□□ 0.9
THUMPD2-202ENST00000403537 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 CD2BP2O95400 341 aaKnown RBP20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 SMPD1P17405 629 aa20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 MDM2Q00987 491 aaPredicted RBP20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 FUT2Q10981 343 aa20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 SCFD2Q8WU76 684 aa20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 PURBQ96QR8 312 aaKnown RBP20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 IWS1Q96ST2 819 aa20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 WDR11Q9BZH6 1224 aa20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 PCDH10Q9P2E7 1040 aa20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 CNTNAP5Q8WYK1 1306 aa20.66■□□□□ 0.9
THUMPD2-202ENST00000403537 MYADML2A6NDP7 307 aa20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 DYNC1LI2O43237 492 aaPredicted RBP20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 PQBP1O60828 265 aaKnown RBP20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 GNAQP50148 359 aa20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 RCAN1P53805 252 aa20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 RABEP1Q15276 862 aa20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 LRIT3Q3SXY7 679 aa20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 SYTL5Q8TDW5 730 aaPredicted RBP20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 LZTS2Q9BRK4 669 aa20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 SPZ1Q9BXG8 430 aa20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 PDGFCQ9NRA1 345 aa20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 PCDHA1Q9Y5I3 950 aa20.65■□□□□ 0.9
THUMPD2-202ENST00000403537 KIAA0355O15063 1070 aa20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 TLR3O15455 904 aaKnown RBP20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 SMARCA1P28370 1054 aa20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 CPT1AP50416 773 aa20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 GHRHRQ02643 423 aa20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 PPP2R5BQ15173 497 aa20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 ME3Q16798 604 aa20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 GPR153Q6NV75 609 aa20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 RBM28Q9NW13 759 aaKnown RBP20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 MCM3APO60318 1980 aa20.64■□□□□ 0.89
THUMPD2-202ENST00000403537 RANBP2P49792 3224 aaKnown RBP20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 LCTP09848 1927 aa20.63■□□□□ 0.89
THUMPD2-202ENST00000403537 PNMA6FA0A0J9YX94 578 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms